Welcome to PhenotypeSeeker

PhenotypeSeeker Web Tool

PhenotypeSeeker Web Tool enables to use pre-trained models to predict phenotypes from bacterial genome data.
Models are trained on datasets dervied from the PATRICBRC database.

The example genome files can be downloaded from the links below:

Enterococcus faecalis fasta (3.6 MB) Pseudomonas aeruginosa fasta.gz (3.6 MB)

Tarball of two genomes tar.gz (3.8 MB)

Select the species: Acinetobacter baumannii Campylobacter coli Clostridioides difficile Enterobacter cloacae Enterococcus faecium Escherichia coli Klebsiella pneumoniae Mycobacterium tuberculosis Neisseria gonorrhoeae Peptoclostridium difficile Pseudomonas aeruginosa Salmonella enterica Shigella sonnei Staphylococcus aureus Staphylococcus haemolyticus Streptococcus pneumoniae

Confidentiality:
The sequences are kept confidential and will be deleted after two hours from the submission.
The results are available for one week at the URL given at the submission.