University of Tartu
Department of Bioinformatics
2012
ABOUT THE PROGRAM
MANUAL
DISCLAIMER
1. Choose the species under the investigation to get PCR primers for detection of the genome
(518 different genera, 1005 different species, 1424 different strains, currently)
Acaryochloris marina MBIC11017
Acetobacter pasteurianus IFO 3283-01
Acetohalobium arabaticum DSM 5501
Acholeplasma laidlawii PG-8A
Achromobacter xylosoxidans A8
Acidaminococcus fermentans DSM 20731
Acidaminococcus intestini RyC-MR95
Acidianus hospitalis W1
Acidilobus saccharovorans 345-15
Acidimicrobium ferrooxidans DSM 10331
Acidiphilium cryptum JF-5
Acidiphilium multivorum AIU301
Acidithiobacillus caldus SM-1
Acidithiobacillus ferrivorans SS3
Acidithiobacillus ferrooxidans ATCC 23270
Acidithiobacillus ferrooxidans ATCC 53993
Acidobacterium capsulatum ATCC 51196
Acidothermus cellulolyticus 11B
Acidovorax citrulli AAC00-1
Acidovorax ebreus TPSY
Acidovorax sp JS42
Aciduliprofundum boonei T469
Acinetobacter baumannii AB0057
Acinetobacter baumannii AB307-0294
Acinetobacter baumannii ACICU
Acinetobacter baumannii ATCC 17978
Acinetobacter baumannii AYE
Acinetobacter baumannii SDF
Acinetobacter sp ADP1
Acinetobacter sp DR1
Actinobacillus pleuropneumoniae serovar 3 str JL03
Actinobacillus pleuropneumoniae serovar 5b str L20
Actinobacillus pleuropneumoniae serovar 7 str AP76
Actinobacillus succinogenes 130Z
Actinosynnema mirum DSM 43827
Aerococcus urinae ACS-120-V-Col10a
Aeromonas hydrophila subsp hydrophila ATCC 7966
Aeromonas salmonicida subsp salmonicida A449
Aeromonas veronii B565
Aeropyrum pernix K1
Aggregatibacter actinomycetemcomitans D11S-1
Aggregatibacter aphrophilus NJ8700
Aggregatibacter phage S1249
Agrobacterium radiobacter K84
Agrobacterium sp H13-3
Agrobacterium tumefaciens str C58
Agrobacterium vitis S4
Akkermansia muciniphila ATCC BAA-835
Alcanivorax borkumensis SK2
Alicycliphilus denitrificans K601
Alicyclobacillus acidocaldarius subsp acidocaldarius DSM 446
Aliivibrio salmonicida LFI1238
Alkalilimnicola ehrlichii MLHE-1
Alkaliphilus metalliredigens QYMF
Alkaliphilus oremlandii OhILAs
Allochromatium vinosum DSM 180
Alteromonas macleodii str Deep ecotype
Alteromonas sp SN2
Aminobacterium colombiense DSM 12261
Ammonifex degensii KC4
Amycolatopsis mediterranei U32
Amycolicicoccus subflavus DQS3-9A1
Anabaena variabilis ATCC 29413
Anaerococcus prevotii DSM 20548
Anaerolinea thermophila UNI-1
Anaeromyxobacter dehalogenans 2CP-1
Anaeromyxobacter dehalogenans 2CP-C
Anaeromyxobacter sp Fw109-5
Anaeromyxobacter sp K
Anaplasma centrale str Israel
Anaplasma marginale str Florida
Anaplasma marginale str St Maries
Anaplasma phagocytophilum HZ
Anoxybacillus flavithermus WK1
Aquifex aeolicus VF5
Arcanobacterium haemolyticum DSM 20595
Archaeoglobus fulgidus DSM 4304
Archaeoglobus profundus DSM 5631
Archaeoglobus veneficus SNP6
Arcobacter butzleri RM4018
Arcobacter nitrofigilis DSM 7299
Aromatoleum aromaticum EbN1
Arthrobacter arilaitensis Re117
Arthrobacter aurescens TC1
Arthrobacter chlorophenolicus A6
Arthrobacter phenanthrenivorans Sphe3
Arthrobacter sp FB24
Aster yellows witches-broom phytoplasma AYWB
Atopobium parvulum DSM 20469
Azoarcus sp BH72
Azorhizobium caulinodans ORS 571
Azospirillum sp B510
Azotobacter vinelandii DJ
Bacillus amyloliquefaciens DSM 7
Bacillus amyloliquefaciens FZB42
Bacillus anthracis str A0248
Bacillus anthracis str Ames
Bacillus anthracis str Ames Ancestor
Bacillus anthracis str CDC 684
Bacillus anthracis str Sterne
Bacillus atrophaeus 1942
Bacillus cereus 03BB102
Bacillus cereus AH187
Bacillus cereus AH820
Bacillus cereus ATCC 10987
Bacillus cereus ATCC 14579
Bacillus cereus B4264
Bacillus cereus biovar anthracis str CI
Bacillus cereus E33L
Bacillus cereus G9842
Bacillus cereus Q1
Bacillus clausii KSM-K16
Bacillus coagulans 2-6
Bacillus cytotoxicus NVH 391-98
Bacillus halodurans C-125
Bacillus licheniformis ATCC 14580
Bacillus megaterium DSM 319
Bacillus megaterium QM B1551
Bacillus pseudofirmus OF4
Bacillus pumilus SAFR-032
Bacillus selenitireducens MLS10
Bacillus subtilis BSn5
Bacillus subtilis subsp spizizenii str W23
Bacillus subtilis subsp spizizenii TU-B-10
Bacillus subtilis subsp subtilis str 168
Bacillus thuringiensis BMB171
Bacillus thuringiensis serovar konkukian str 97-27
Bacillus thuringiensis str Al Hakam
Bacillus tusciae DSM 2912
Bacillus weihenstephanensis KBAB4
Bacteroides fragilis NCTC 9343
Bacteroides fragilis YCH46
Bacteroides helcogenes P 36-108
Bacteroides salanitronis DSM 18170
Bacteroides thetaiotaomicron VPI-5482
Bacteroides vulgatus ATCC 8482
Bartonella bacilliformis KC583
Bartonella clarridgeiae 73
Bartonella grahamii as4aup
Bartonella henselae str Houston-1
Bartonella quintana str Toulouse
Bartonella tribocorum CIP 105476
Baumannia cicadellinicola str Hc
Bdellovibrio bacteriovorus HD100
Beijerinckia indica subsp indica ATCC 9039
Beutenbergia cavernae DSM 12333
Bifidobacterium adolescentis ATCC 15703
Bifidobacterium animalis subsp lactis AD011
Bifidobacterium animalis subsp lactis Bl-04
Bifidobacterium animalis subsp lactis DSM 10140
Bifidobacterium bifidum PRL2010
Bifidobacterium bifidum S17
Bifidobacterium dentium Bd1
Bifidobacterium longum DJO10A
Bifidobacterium longum NCC2705
Bifidobacterium longum subsp infantis 157F
Bifidobacterium longum subsp infantis ATCC 15697
Bifidobacterium longum subsp longum BBMN68
Bifidobacterium longum subsp longum JCM 1217
Bifidobacterium longum subsp longum JDM301
Blattabacterium sp Blattella germanica str Bge
Blattabacterium sp Periplaneta americana str BPLAN
Bordetella avium 197N
Bordetella bronchiseptica RB50
Bordetella parapertussis 12822
Bordetella pertussis Tohama I
Bordetella petrii DSM 12804
Borrelia afzelii PKo
Borrelia bissettii DN127
Borrelia burgdorferi B31
Borrelia burgdorferi ZS7
Borrelia duttonii Ly
Borrelia garinii PBi
Borrelia hermsii DAH
Borrelia recurrentis A1
Borrelia turicatae 91E135
Brachybacterium faecium DSM 4810
Brachyspira hyodysenteriae WA1
Brachyspira murdochii DSM 12563
Brachyspira pilosicoli 95_1000
Bradyrhizobium japonicum USDA 110
Bradyrhizobium sp BTAi1
Bradyrhizobium sp ORS 278
Brevibacillus brevis NBRC 100599
Brucella abortus bv 1 str 9-941
Brucella abortus S19
Brucella canis ATCC 23365
Brucella melitensis ATCC 23457
Brucella melitensis biovar Abortus 2308
Brucella melitensis bv 1 str 16M
Brucella microti CCM 4915
Brucella ovis ATCC 25840
Brucella pinnipedialis B2_94
Brucella suis 1330
Brucella suis ATCC 23445
Buchnera aphidicola Cinara tujafilina
Buchnera aphidicola str 5A Acyrthosiphon pisum
Buchnera aphidicola str APS Acyrthosiphon pisum
Buchnera aphidicola str Bp Baizongia pistaciae
Buchnera aphidicola str Cc Cinara cedri
Buchnera aphidicola str Sg Schizaphis graminum
Buchnera aphidicola str Tuc7 Acyrthosiphon pisum
Burkholderia ambifaria AMMD
Burkholderia ambifaria MC40-6
Burkholderia cenocepacia AU 1054
Burkholderia cenocepacia HI2424
Burkholderia cenocepacia J2315
Burkholderia cenocepacia MC0-3
Burkholderia gladioli BSR3
Burkholderia glumae BGR1
Burkholderia mallei ATCC 23344
Burkholderia mallei NCTC 10229
Burkholderia mallei NCTC 10247
Burkholderia mallei SAVP1
Burkholderia multivorans ATCC 17616
Burkholderia multivorans ATCC 17616
Burkholderia phymatum STM815
Burkholderia phytofirmans PsJN
Burkholderia pseudomallei 1106a
Burkholderia pseudomallei 1710b
Burkholderia pseudomallei 668
Burkholderia pseudomallei K96243
Burkholderia rhizoxinica HKI 454
Burkholderia sp 383
Burkholderia thailandensis E264
Burkholderia vietnamiensis G4
Burkholderia xenovorans LB400
Butyrivibrio proteoclasticus B316
Caldicellulosiruptor bescii DSM 6725
Caldicellulosiruptor hydrothermalis 108
Caldicellulosiruptor kristjanssonii 177R1B
Caldicellulosiruptor kronotskyensis 2002
Caldicellulosiruptor obsidiansis OB47
Caldicellulosiruptor owensensis OL
Caldicellulosiruptor saccharolyticus DSM 8903
Calditerrivibrio nitroreducens DSM 19672
Caldivirga maquilingensis IC-167
Campylobacter concisus 13826
Campylobacter curvus 52592
Campylobacter fetus subsp fetus 82-40
Campylobacter hominis ATCC BAA-381
Campylobacter jejuni RM1221
Campylobacter jejuni subsp doylei 26997
Campylobacter jejuni subsp jejuni 81116
Campylobacter jejuni subsp jejuni 81-176
Campylobacter jejuni subsp jejuni ICDCCJ07001
Campylobacter jejuni subsp jejuni NCTC 11168
Campylobacter lari RM2100
Candidatus Accumulibacter phosphatis clade IIA str UW-1
Candidatus Amoebophilus asiaticus 5a2
Candidatus Arthromitus sp SFB-mouse-Japan
Candidatus Arthromitus sp SFB-rat-Yit
Candidatus Azobacteroides pseudotrichonymphae genomovar CFP2
Candidatus Blochmannia floridanus
Candidatus Blochmannia pennsylvanicus str BPEN
Candidatus Blochmannia vafer str BVAF
Candidatus Carsonella ruddii PV
Candidatus Chloracidobacterium thermophilum B
Candidatus Desulforudis audaxviator MP104C
Candidatus Hamiltonella defensa 5AT Acyrthosiphon pisum
Candidatus Hodgkinia cicadicola Dsem
Candidatus Korarchaeum cryptofilum OPF8
Candidatus Koribacter versatilis Ellin345
Candidatus Liberibacter asiaticus str psy62
Candidatus Liberibacter solanacearum CLso-ZC1
Candidatus Midichloria mitochondrii IricVA
Candidatus Moranella endobia PCIT
Candidatus Nitrospira defluvii
Candidatus Pelagibacter sp IMCC9063
Candidatus Pelagibacter ubique HTCC1062
Candidatus Phytoplasma australiense
Candidatus Phytoplasma mali
Candidatus Protochlamydia amoebophila UWE25
Candidatus Puniceispirillum marinum IMCC1322
Candidatus Riesia pediculicola USDA
Candidatus Ruthia magnifica str Cm Calyptogena magnifica
Candidatus Solibacter usitatus Ellin6076
Candidatus Sulcia muelleri CARI
Candidatus Sulcia muelleri DMIN
Candidatus Sulcia muelleri GWSS
Candidatus Sulcia muelleri SMDSEM
Candidatus Tremblaya princeps PCIT
Candidatus Vesicomyosocius okutanii HA
Candidatus Zinderia insecticola CARI
Capnocytophaga canimorsus Cc5
Capnocytophaga ochracea DSM 7271
Carboxydothermus hydrogenoformans Z-2901
Carnobacterium sp 17-4
Catenulispora acidiphila DSM 44928
Caulobacter crescentus CB15
Caulobacter crescentus NA1000
Caulobacter sp K31
Cellulomonas fimi ATCC 484
Cellulomonas flavigena DSM 20109
Cellulophaga algicola DSM 14237
Cellulophaga lytica DSM 7489
Cellvibrio gilvus ATCC 13127
Cellvibrio japonicus Ueda107
Cenarchaeum symbiosum A
Chelativorans sp BNC1
Chitinophaga pinensis DSM 2588
Chlamydia muridarum Nigg
Chlamydia trachomatis 434_Bu
Chlamydia trachomatis A_HAR-13
Chlamydia trachomatis B_Jali20_OT
Chlamydia trachomatis B_TZ1A828_OT
Chlamydia trachomatis D_UW-3_CX
Chlamydia trachomatis L2b_UCH-1_proctitis
Chlamydia trachomatis L2c
Chlamydophila abortus S26_3
Chlamydophila caviae GPIC
Chlamydophila felis Fe_C-56
Chlamydophila pecorum E58
Chlamydophila pneumoniae AR39
Chlamydophila pneumoniae CWL029
Chlamydophila pneumoniae J138
Chlamydophila pneumoniae TW-183
Chlamydophila psittaci 6BC
Chlorobaculum parvum NCIB 8327
Chlorobium chlorochromatii CaD3
Chlorobium limicola DSM 245
Chlorobium luteolum DSM 273
Chlorobium phaeobacteroides BS1
Chlorobium phaeobacteroides DSM 266
Chlorobium phaeovibrioides DSM 265
Chlorobium tepidum TLS
Chloroflexus aggregans DSM 9485
Chloroflexus aurantiacus J-10-fl
Chloroflexus sp Y-400-fl
Chloroherpeton thalassium ATCC 35110
Chromobacterium violaceum ATCC 12472
Chromohalobacter salexigens DSM 3043
Citrobacter koseri ATCC BAA-895
Citrobacter rodentium ICC168
Clavibacter michiganensis subsp michiganensis NCPPB 382
Clavibacter michiganensis subsp sepedonicus
Clostridiales genomosp BVAB3 str UPII9-5
Clostridium acetobutylicum ATCC 824
Clostridium acetobutylicum DSM 1731
Clostridium beijerinckii NCIMB 8052
Clostridium botulinum A str ATCC 19397
Clostridium botulinum A str ATCC 3502
Clostridium botulinum A str Hall
Clostridium botulinum A2 str Kyoto
Clostridium botulinum A3 str Loch Maree
Clostridium botulinum B str Eklund 17B
Clostridium botulinum B1 str Okra
Clostridium botulinum Ba4 str 657
Clostridium botulinum BKT015925
Clostridium botulinum E3 str Alaska E43
Clostridium botulinum F str Langeland
Clostridium cellulolyticum H10
Clostridium cellulovorans 743B
Clostridium difficile 630
Clostridium difficile CD196
Clostridium difficile R20291
Clostridium kluyveri DSM 555
Clostridium kluyveri NBRC 12016
Clostridium ljungdahlii DSM 13528
Clostridium novyi NT
Clostridium perfringens ATCC 13124
Clostridium perfringens str 13
Clostridium phytofermentans ISDg
Clostridium saccharolyticum WM1
Clostridium sp SY8519
Clostridium sticklandii DSM 519
Clostridium tetani E88
Clostridium thermocellum ATCC 27405
Collimonas fungivorans Ter331
Colwellia psychrerythraea 34H
Comamonas testosteroni CNB-2
Conexibacter woesei DSM 14684
Coprothermobacter proteolyticus DSM 5265
Coraliomargarita akajimensis DSM 45221
Coriobacterium glomerans PW2
Corynebacterium aurimucosum ATCC 700975
Corynebacterium diphtheriae NCTC 13129
Corynebacterium efficiens YS-314
Corynebacterium glutamicum ATCC 13032
Corynebacterium glutamicum R
Corynebacterium jeikeium K411
Corynebacterium kroppenstedtii DSM 44385
Corynebacterium pseudotuberculosis FRC41
Corynebacterium ulcerans BR-AD22
Corynebacterium urealyticum DSM 7109
Corynebacterium variabile DSM 44702
Coxiella burnetii CbuG_Q212
Coxiella burnetii CbuK_Q154
Coxiella burnetii Dugway 5J108-111
Coxiella burnetii RSA 331
Coxiella burnetii RSA 493
Croceibacter atlanticus HTCC2559
Cronobacter sakazakii ATCC BAA-894
Cronobacter turicensis z3032
Cryptobacterium curtum DSM 15641
Cupriavidus metallidurans CH34
Cupriavidus necator N-1
Cupriavidus taiwanensis LMG 19424
cyanobacterium UCYN-A
Cyanothece sp ATCC 51142
Cyanothece sp PCC 7424
Cyanothece sp PCC 7425
Cyanothece sp PCC 7822
Cyanothece sp PCC 8801
Cyanothece sp PCC 8802
Cyclobacterium marinum DSM 745
Cytophaga hutchinsonii ATCC 33406
Dechloromonas aromatica RCB
Deferribacter desulfuricans SSM1
Dehalococcoides ethenogenes 195
Dehalococcoides sp BAV1
Dehalococcoides sp CBDB1
Dehalococcoides sp GT
Dehalococcoides sp VS
Deinococcus deserti VCD115
Deinococcus geothermalis DSM 11300
Deinococcus maricopensis DSM 21211
Deinococcus proteolyticus MRP
Deinococcus radiodurans R1
Delftia acidovorans SPH-1
Delftia sp Cs1-4
Denitrovibrio acetiphilus DSM 12809
Desulfarculus baarsii DSM 2075
Desulfatibacillum alkenivorans AK-01
Desulfitobacterium hafniense DCB-2
Desulfitobacterium hafniense Y51
Desulfobacca acetoxidans DSM 11109
Desulfobacterium autotrophicum HRM2
Desulfobulbus propionicus DSM 2032
Desulfococcus oleovorans Hxd3
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028
Desulfotalea psychrophila LSv54
Desulfotomaculum acetoxidans DSM 771
Desulfotomaculum carboxydivorans CO-1-SRB
Desulfotomaculum kuznetsovii DSM 6115
Desulfotomaculum reducens MI-1
Desulfotomaculum ruminis DSM 2154
Desulfovibrio alaskensis G20
Desulfovibrio desulfuricans subsp desulfuricans str ATCC 27774
Desulfovibrio magneticus RS-1
Desulfovibrio salexigens DSM 2638
Desulfovibrio vulgaris DP4
Desulfovibrio vulgaris str Hildenborough
Desulfovibrio vulgaris str Miyazaki F
Desulfurivibrio alkaliphilus AHT2
Desulfurobacterium thermolithotrophum DSM 11699
Desulfurococcus kamchatkensis 1221n
Desulfurococcus mucosus DSM 2162
Dichelobacter nodosus VCS1703A
Dickeya dadantii 3937
Dickeya dadantii Ech586
Dickeya dadantii Ech703
Dickeya zeae Ech1591
Dictyoglomus thermophilum H-6-12
Dictyoglomus turgidum DSM 6724
Dinoroseobacter shibae DFL 12
Dyadobacter fermentans DSM 18053
Edwardsiella ictaluri 93-146
Edwardsiella tarda EIB202
Eggerthella lenta DSM 2243
Eggerthella sp YY7918
Ehrlichia canis str Jake
Ehrlichia chaffeensis str Arkansas
Ehrlichia ruminantium str Gardel
Ehrlichia ruminantium str Welgevonden
Elusimicrobium minutum Pei191
Enterobacter aerogenes KCTC 2190
Enterobacter asburiae LF7a
Enterobacter cloacae SCF1
Enterobacter cloacae subsp cloacae ATCC 13047
Enterobacter sp 638
Enterococcus faecalis V583
Erwinia amylovora ATCC 49946
Erwinia amylovora CFBP1430
Erwinia billingiae Eb661
Erwinia pyrifoliae Ep1_96
Erwinia tasmaniensis Et1_99
Erysipelothrix rhusiopathiae str Fujisawa
Erythrobacter litoralis HTCC2594
Escherichia coli 536
Escherichia coli 55989
Escherichia coli APEC O1
Escherichia coli ATCC 8739
Escherichia coli B str REL606
Escherichia coli BL21-GoldDE3pLysS AG
Escherichia coli BW2952
Escherichia coli CFT073
Escherichia coli E24377A
Escherichia coli ED1a
Escherichia coli HS
Escherichia coli IAI1
Escherichia coli IAI39
Escherichia coli O103_H2 str 12009
Escherichia coli O111_H- str 11128
Escherichia coli O127_H6 str E2348_69
Escherichia coli O157_H7 str EC4115
Escherichia coli O157_H7 str EDL933
Escherichia coli O157_H7 str Sakai
Escherichia coli O157_H7 str TW14359
Escherichia coli O26_H11 str 11368
Escherichia coli O55_H7 str CB9615
Escherichia coli S88
Escherichia coli SE11
Escherichia coli SMS-3-5
Escherichia coli str K-12 substr DH10B
Escherichia coli str K-12 substr MG1655
Escherichia coli UMN026
Escherichia coli UTI89
Escherichia fergusonii ATCC 35469
Eubacterium eligens ATCC 27750
Eubacterium limosum KIST612
Eubacterium rectale ATCC 33656
Exiguobacterium sibiricum 255-15
Exiguobacterium sp AT1b
Ferrimonas balearica DSM 9799
Ferroglobus placidus DSM 10642
Fervidobacterium nodosum Rt17-B1
Fibrobacter succinogenes subsp succinogenes S85
Finegoldia magna ATCC 29328
Flavobacteriaceae bacterium 3519-10
Flavobacterium branchiophilum FL-15
Flavobacterium johnsoniae UW101
Flavobacterium psychrophilum JIP02_86
Flexistipes sinusarabici DSM 4947
Fluviicola taffensis DSM 16823
Francisella novicida U112
Francisella philomiragia subsp philomiragia ATCC 25017
Francisella sp TX077308
Francisella tularensis subsp holarctica FTNF002-00
Francisella tularensis subsp holarctica LVS
Francisella tularensis subsp holarctica OSU18
Francisella tularensis subsp mediasiatica FSC147
Francisella tularensis subsp tularensis FSC198
Francisella tularensis subsp tularensis SCHU S4
Francisella tularensis subsp tularensis WY96-3418
Frankia alni ACN14a
Frankia sp CcI3
Frankia sp EAN1pec
Fusobacterium nucleatum subsp nucleatum ATCC 25586
Gallibacterium anatis UMN179
Gallionella capsiferriformans ES-2
gamma proteobacterium HdN1
Gardnerella vaginalis 409-05
Gemmatimonas aurantiaca T-27
Geobacillus kaustophilus HTA426
Geobacillus sp C56-T3
Geobacillus sp WCH70
Geobacillus sp Y412MC61
Geobacillus thermodenitrificans NG80-2
Geobacillus thermoglucosidasius C56-YS93
Geobacter bemidjiensis Bem
Geobacter lovleyi SZ
Geobacter metallireducens GS-15
Geobacter sp FRC-32
Geobacter sp M21
Geobacter sulfurreducens PCA
Geobacter uraniireducens Rf4
Geodermatophilus obscurus DSM 43160
Glaciecola nitratireducens FR1064
Glaciecola sp 4H-3-7plusYE-5
Gloeobacter violaceus PCC 7421
Gluconacetobacter diazotrophicus PAl 5
Gluconobacter oxydans 621H
Gordonia bronchialis DSM 43247
Gramella forsetii KT0803
Granulibacter bethesdensis CGDNIH1
Haemophilus ducreyi 35000HP
Haemophilus influenzae 86-028NP
Haemophilus influenzae F3031
Haemophilus influenzae F3047
Haemophilus influenzae PittEE
Haemophilus influenzae PittGG
Haemophilus influenzae Rd KW20
Haemophilus parainfluenzae T3T1
Haemophilus parasuis SH0165
Haemophilus somnus 129PT
Haemophilus somnus 2336
Hahella chejuensis KCTC 2396
Halalkalicoccus jeotgali B3
Halanaerobium hydrogeniformans
Haliangium ochraceum DSM 14365
Haliscomenobacter hydrossis DSM 1100
Haloarcula hispanica ATCC 33960
Haloarcula marismortui ATCC 43049
Halobacterium salinarum R1
Halobacterium sp NRC-1
Haloferax volcanii DS2
Halomicrobium mukohataei DSM 12286
Halomonas elongata DSM 2581
halophilic archaeon DL31
Halopiger xanaduensis SH-6
Haloquadratum walsbyi DSM 16790
Halorhabdus utahensis DSM 12940
Halorhodospira halophila SL1
Halorubrum lacusprofundi ATCC 49239
Haloterrigena turkmenica DSM 5511
Halothermothrix orenii H 168
Halothiobacillus neapolitanus c2
Helicobacter acinonychis str Sheeba
Helicobacter bizzozeronii CIII-1
Helicobacter felis ATCC 49179
Helicobacter hepaticus ATCC 51449
Helicobacter mustelae 12198
Helicobacter pylori 26695
Helicobacter pylori B38
Helicobacter pylori B8
Helicobacter pylori G27
Helicobacter pylori HPAG1
Helicobacter pylori J99
Helicobacter pylori P12
Helicobacter pylori PeCan4
Helicobacter pylori Shi470
Helicobacter pylori SJM180
Heliobacterium modesticaldum Ice1
Herbaspirillum seropedicae SmR1
Herminiimonas arsenicoxydans
Herpetosiphon aurantiacus DSM 785
Hippea maritima DSM 10411
Hirschia baltica ATCC 49814
Hydrogenobacter thermophilus TK-6
Hydrogenobaculum sp Y04AAS1
Hyperthermus butylicus DSM 5456
Hyphomicrobium denitrificans ATCC 51888
Hyphomicrobium sp MC1
Hyphomonas neptunium ATCC 15444
Idiomarina loihiensis L2TR
Ignicoccus hospitalis KIN4_I
Ignisphaera aggregans DSM 17230
Ilyobacter polytropus DSM 2926
Intrasporangium calvum DSM 43043
Isoptericola variabilis 225
Isosphaera pallida ATCC 43644
Jannaschia sp CCS1
Janthinobacterium sp Marseille
Jonesia denitrificans DSM 20603
Kangiella koreensis DSM 16069
Ketogulonicigenium vulgare Y25
Kineococcus radiotolerans SRS30216
Klebsiella pneumoniae 342
Klebsiella pneumoniae subsp pneumoniae MGH 78578
Klebsiella pneumoniae subsp pneumoniae NTUH-K2044
Klebsiella variicola At-22
Kocuria rhizophila DC2201
Kosmotoga olearia TBF 1951
Kribbella flavida DSM 17836
Krokinobacter sp 4H-3-7-5
Kytococcus sedentarius DSM 20547
Lacinutrix sp 5H-3-7-4
Lactobacillus acidophilus 30SC
Lactobacillus acidophilus NCFM
Lactobacillus amylovorus GRL 1112
Lactobacillus brevis ATCC 367
Lactobacillus buchneri NRRL B-30929
Lactobacillus casei ATCC 334
Lactobacillus casei BL23
Lactobacillus casei str Zhang
Lactobacillus crispatus ST1
Lactobacillus delbrueckii subsp bulgaricus ATCC 11842
Lactobacillus delbrueckii subsp bulgaricus ATCC BAA-365
Lactobacillus delbrueckii subsp bulgaricus ND02
Lactobacillus fermentum IFO 3956
Lactobacillus gasseri ATCC 33323
Lactobacillus helveticus DPC 4571
Lactobacillus johnsonii FI9785
Lactobacillus johnsonii NCC 533
Lactobacillus kefiranofaciens ZW3
Lactobacillus plantarum JDM1
Lactobacillus plantarum subsp plantarum ST-III
Lactobacillus plantarum WCFS1
Lactobacillus reuteri DSM 20016
Lactobacillus reuteri JCM 1112
Lactobacillus reuteri SD2112
Lactobacillus rhamnosus GG
Lactobacillus rhamnosus Lc 705
Lactobacillus ruminis ATCC 27782
Lactobacillus sakei subsp sakei 23K
Lactobacillus salivarius UCC118
Lactobacillus sanfranciscensis TMW 11304
Lactococcus garvieae ATCC 49156
Lactococcus lactis subsp cremoris MG1363
Lactococcus lactis subsp cremoris SK11
Lactococcus lactis subsp lactis Il1403
Lactococcus lactis subsp lactis KF147
Laribacter hongkongensis HLHK9
Lawsonia intracellularis PHE_MN1-00
Leadbetterella byssophila DSM 17132
Legionella longbeachae NSW150
Legionella pneumophila 2300_99 Alcoy
Legionella pneumophila str Corby
Legionella pneumophila str Lens
Legionella pneumophila str Paris
Legionella pneumophila subsp pneumophila str Philadelphia 1
Leifsonia xyli subsp xyli str CTCB07
Leptospira biflexa serovar Patoc strain Patoc 1 Ames
Leptospira biflexa serovar Patoc strain Patoc 1 Paris
Leptospira borgpetersenii serovar Hardjo-bovis JB197
Leptospira borgpetersenii serovar Hardjo-bovis L550
Leptospira interrogans serovar Copenhageni str Fiocruz L1-130
Leptospira interrogans serovar Lai str 56601
Leptothrix cholodnii SP-6
Leptotrichia buccalis C-1013-b
Leuconostoc citreum KM20
Leuconostoc gasicomitatum LMG 18811
Leuconostoc kimchii IMSNU 11154
Leuconostoc mesenteroides subsp mesenteroides ATCC 8293
Leuconostoc sp C2
Listeria innocua Clip11262
Listeria ivanovii subsp ivanovii PAM 55
Listeria monocytogenes 08-5578
Listeria monocytogenes 08-5923
Listeria monocytogenes EGD-e
Listeria monocytogenes HCC23
Listeria monocytogenes serotype 4b str CLIP 80459
Listeria monocytogenes serotype 4b str F2365
Listeria seeligeri serovar 1_2b str SLCC3954
Listeria welshimeri serovar 6b str SLCC5334
Lysinibacillus sphaericus C3-41
Macrococcus caseolyticus JCSC5402
Magnetococcus sp MC-1
Magnetospirillum magneticum AMB-1
Mahella australiensis 50-1 BON
Mannheimia succiniciproducens MBEL55E
Maribacter sp HTCC2170
Maricaulis maris MCS10
Marinithermus hydrothermalis DSM 14884
Marinobacter aquaeolei VT8
Marinomonas mediterranea MMB-1
Marinomonas posidonica IVIA-Po-181
Marinomonas sp MWYL1
Marivirga tractuosa DSM 4126
Megasphaera elsdenii DSM 20460
Meiothermus ruber DSM 1279
Meiothermus silvanus DSM 9946
Melissococcus plutonius ATCC 35311
Mesoplasma florum L1
Mesorhizobium ciceri biovar biserrulae WSM1271
Mesorhizobium loti MAFF303099
Mesorhizobium opportunistum WSM2075
Metallosphaera cuprina Ar-4
Metallosphaera sedula DSM 5348
Methanobacterium sp AL-21
Methanobacterium sp SWAN-1
Methanobrevibacter ruminantium M1
Methanobrevibacter smithii ATCC 35061
Methanocaldococcus fervens AG86
Methanocaldococcus infernus ME
Methanocaldococcus jannaschii DSM 2661
Methanocaldococcus sp FS406-22
Methanocaldococcus vulcanius M7
Methanocella paludicola SANAE
Methanococcoides burtonii DSM 6242
Methanococcus aeolicus Nankai-3
Methanococcus maripaludis C5
Methanococcus maripaludis C6
Methanococcus maripaludis C7
Methanococcus maripaludis S2
Methanococcus maripaludis X1
Methanococcus vannielii SB
Methanococcus voltae A3
Methanocorpusculum labreanum Z
Methanoculleus marisnigri JR1
Methanohalobium evestigatum Z-7303
Methanohalophilus mahii DSM 5219
Methanoplanus petrolearius DSM 11571
Methanopyrus kandleri AV19
Methanoregula boonei 6A8
Methanosaeta concilii GP6
Methanosaeta thermophila PT
Methanosalsum zhilinae DSM 4017
Methanosarcina acetivorans C2A
Methanosarcina barkeri str Fusaro
Methanosarcina mazei Go1
Methanosphaera stadtmanae DSM 3091
Methanosphaerula palustris E1-9c
Methanospirillum hungatei JF-1
Methanothermobacter marburgensis str Marburg
Methanothermobacter thermautotrophicus str Delta H
Methanothermus fervidus DSM 2088
Methanotorris igneus Kol 5
Methylacidiphilum infernorum V4
Methylibium petroleiphilum PM1
Methylobacillus flagellatus KT
Methylobacterium chloromethanicum CM4
Methylobacterium extorquens AM1
Methylobacterium extorquens DM4
Methylobacterium extorquens PA1
Methylobacterium nodulans ORS 2060
Methylobacterium populi BJ001
Methylobacterium radiotolerans JCM 2831
Methylobacterium sp 4-46
Methylocella silvestris BL2
Methylococcus capsulatus str Bath
Methylomonas methanica MC09
Methylotenera mobilis JLW8
Methylotenera versatilis 301
Methylovorus glucosetrophus SIP3-4
Methylovorus sp MP688
Micavibrio aeruginosavorus ARL-13
Microbacterium testaceum StLB037
Micrococcus luteus NCTC 2665
Microcystis aeruginosa NIES-843
Microlunatus phosphovorus NM-1
Mobiluncus curtisii ATCC 43063
Moorella thermoacetica ATCC 39073
Moraxella catarrhalis RH4
Muricauda ruestringensis DSM 13258
Mycobacterium abscessus ATCC 19977
Mycobacterium africanum GM041182
Mycobacterium avium 104
Mycobacterium avium subsp paratuberculosis K-10
Mycobacterium bovis AF2122_97
Mycobacterium bovis BCG str Pasteur 1173P2
Mycobacterium bovis BCG str Tokyo 172
Mycobacterium canettii CIPT 140010059
Mycobacterium gilvum PYR-GCK
Mycobacterium leprae Br4923
Mycobacterium leprae TN
Mycobacterium marinum M
Mycobacterium smegmatis str MC2 155
Mycobacterium sp JDM601
Mycobacterium sp JLS
Mycobacterium sp KMS
Mycobacterium sp MCS
Mycobacterium sp Spyr1
Mycobacterium tuberculosis CDC1551
Mycobacterium tuberculosis F11
Mycobacterium tuberculosis H37Ra
Mycobacterium tuberculosis H37Rv
Mycobacterium tuberculosis KZN 1435
Mycobacterium ulcerans Agy99
Mycobacterium vanbaalenii PYR-1
Mycoplasma agalactiae
Mycoplasma agalactiae PG2
Mycoplasma arthritidis 158L3-1
Mycoplasma bovis Hubei-1
Mycoplasma bovis PG45
Mycoplasma capricolum subsp capricolum ATCC 27343
Mycoplasma conjunctivae HRC_581
Mycoplasma crocodyli MP145
Mycoplasma fermentans JER
Mycoplasma fermentans M64
Mycoplasma gallisepticum str Rlow
Mycoplasma genitalium G37
Mycoplasma haemofelis str Langford 1
Mycoplasma hominis ATCC 23114
Mycoplasma hyopneumoniae 232
Mycoplasma hyopneumoniae 7448
Mycoplasma hyopneumoniae J
Mycoplasma hyorhinis HUB-1
Mycoplasma leachii PG50
Mycoplasma mobile 163K
Mycoplasma mycoides subsp capri LC str 95010
Mycoplasma mycoides subsp mycoides SC str PG1
Mycoplasma penetrans HF-2
Mycoplasma pneumoniae M129
Mycoplasma pulmonis UAB CTIP
Mycoplasma putrefaciens KS1
Mycoplasma suis KI3806
Mycoplasma synoviae 53
Myxococcus fulvus HW-1
Myxococcus xanthus DK 1622
Nakamurella multipartita DSM 44233
Nanoarchaeum equitans Kin4-M
Natranaerobius thermophilus JW_NM-WN-LF
Natrialba magadii ATCC 43099
Natronomonas pharaonis DSM 2160
Nautilia profundicola AmH
Neisseria gonorrhoeae FA 1090
Neisseria gonorrhoeae NCCP11945
Neisseria lactamica 020-06
Neisseria meningitidis 053442
Neisseria meningitidis alpha14
Neisseria meningitidis FAM18
Neisseria meningitidis MC58
Neisseria meningitidis Z2491
Neorickettsia risticii str Illinois
Neorickettsia sennetsu str Miyayama
Nitratifractor salsuginis DSM 16511
Nitratiruptor sp SB155-2
Nitrobacter hamburgensis X14
Nitrobacter winogradskyi Nb-255
Nitrosococcus halophilus Nc4
Nitrosococcus oceani ATCC 19707
Nitrosococcus watsonii C-113
Nitrosomonas europaea ATCC 19718
Nitrosomonas eutropha C91
Nitrosomonas sp Is79A3
Nitrosopumilus maritimus SCM1
Nitrosospira multiformis ATCC 25196
Nocardia farcinica IFM 10152
Nocardioides sp JS614
Nocardiopsis dassonvillei subsp dassonvillei DSM 43111
Nostoc azollae 0708
Nostoc punctiforme PCC 73102
Nostoc sp PCC 7120
Novosphingobium aromaticivorans DSM 12444
Novosphingobium sp PP1Y
Oceanithermus profundus DSM 14977
Oceanobacillus iheyensis HTE831
Ochrobactrum anthropi ATCC 49188
Odoribacter splanchnicus DSM 20712
Oenococcus oeni PSU-1
Oligotropha carboxidovorans OM5
Olsenella uli DSM 7084
Onion yellows phytoplasma OY-M
Opitutus terrae PB90-1
Orientia tsutsugamushi str Boryong
Orientia tsutsugamushi str Ikeda
Oscillibacter valericigenes Sjm18-20
Paenibacillus mucilaginosus KNP414
Paenibacillus polymyxa E681
Paenibacillus polymyxa SC2
Paenibacillus sp JDR-2
Paenibacillus sp Y412MC10
Paludibacter propionicigenes WB4
Pantoea ananatis LMG 20103
Pantoea vagans C9-1
Parabacteroides distasonis ATCC 8503
Parachlamydia acanthamoebae UV7
Paracoccus denitrificans PD1222
Parvibaculum lavamentivorans DS-1
Parvularcula bermudensis HTCC2503
Pasteurella multocida subsp multocida str Pm70
Pectobacterium atrosepticum SCRI1043
Pectobacterium carotovorum subsp carotovorum PC1
Pectobacterium wasabiae WPP163
Pediococcus pentosaceus ATCC 25745
Pedobacter heparinus DSM 2366
Pelobacter carbinolicus DSM 2380
Pelobacter propionicus DSM 2379
Pelodictyon phaeoclathratiforme BU-1
Pelotomaculum thermopropionicum SI
Persephonella marina EX-H1
Petrotoga mobilis SJ95
Phenylobacterium zucineum HLK1
Photobacterium profundum SS9
Photorhabdus asymbiotica subsp asymbiotica ATCC 43949
Photorhabdus luminescens subsp laumondii TTO1
Picrophilus torridus DSM 9790
Pirellula staleyi DSM 6068
Planctomyces limnophilus DSM 3776
Polaromonas naphthalenivorans CJ2
Polaromonas sp JS666
Polymorphum gilvum SL003B-26A1
Polynucleobacter necessarius subsp asymbioticus QLW-P1DMWA-1
Polynucleobacter necessarius subsp necessarius STIR1
Porphyromonas asaccharolytica DSM 20707
Porphyromonas gingivalis ATCC 33277
Porphyromonas gingivalis TDC60
Porphyromonas gingivalis W83
Prevotella denticola F0289
Prevotella melaninogenica ATCC 25845
Prevotella ruminicola 23
Prochlorococcus marinus str AS9601
Prochlorococcus marinus str MIT 9211
Prochlorococcus marinus str MIT 9215
Prochlorococcus marinus str MIT 9301
Prochlorococcus marinus str MIT 9303
Prochlorococcus marinus str MIT 9312
Prochlorococcus marinus str MIT 9313
Prochlorococcus marinus str MIT 9515
Prochlorococcus marinus str NATL1A
Prochlorococcus marinus str NATL2A
Prochlorococcus marinus subsp marinus str CCMP1375
Prochlorococcus marinus subsp pastoris str CCMP1986
Propionibacterium acnes KPA171202
Propionibacterium acnes SK137
Propionibacterium freudenreichii subsp shermanii CIRM-BIA1
Prosthecochloris aestuarii DSM 271
Proteus mirabilis HI4320
Pseudoalteromonas atlantica T6c
Pseudoalteromonas haloplanktis TAC125
Pseudoalteromonas sp SM9913
Pseudogulbenkiania sp NH8B
Pseudomonas aeruginosa LESB58
Pseudomonas aeruginosa PA7
Pseudomonas aeruginosa PAO1
Pseudomonas aeruginosa UCBPP-PA14
Pseudomonas brassicacearum subsp brassicacearum NFM421
Pseudomonas entomophila L48
Pseudomonas fluorescens Pf0-1
Pseudomonas fluorescens Pf-5
Pseudomonas fluorescens SBW25
Pseudomonas fulva 12-X
Pseudomonas mendocina NK-01
Pseudomonas mendocina ymp
Pseudomonas putida F1
Pseudomonas putida GB-1
Pseudomonas putida KT2440
Pseudomonas putida S16
Pseudomonas putida W619
Pseudomonas stutzeri A1501
Pseudomonas stutzeri ATCC 17588 = LMG 11199
Pseudomonas syringae pv phaseolicola 1448A
Pseudomonas syringae pv syringae B728a
Pseudomonas syringae pv tomato str DC3000
Pseudonocardia dioxanivorans CB1190
Pseudoxanthomonas suwonensis 11-1
Psychrobacter arcticus 273-4
Psychrobacter cryohalolentis K5
Psychrobacter sp PRwf-1
Psychromonas ingrahamii 37
Pusillimonas sp T7-7
Pyrobaculum aerophilum str IM2
Pyrobaculum arsenaticum DSM 13514
Pyrobaculum calidifontis JCM 11548
Pyrobaculum islandicum DSM 4184
Pyrococcus abyssi GE5
Pyrococcus furiosus DSM 3638
Pyrococcus horikoshii OT3
Pyrococcus sp NA2
Pyrococcus yayanosii CH1
Pyrolobus fumarii 1A
Rahnella sp Y9602
Ralstonia eutropha H16
Ralstonia eutropha JMP134
Ralstonia pickettii 12D
Ralstonia pickettii 12J
Ralstonia solanacearum CFBP2957
Ralstonia solanacearum GMI1000
Ralstonia solanacearum PSI07
Ramlibacter tataouinensis TTB310
Renibacterium salmoninarum ATCC 33209
Rhizobium etli CFN 42
Rhizobium etli CIAT 652
Rhizobium leguminosarum bv trifolii WSM1325
Rhizobium leguminosarum bv trifolii WSM2304
Rhizobium leguminosarum bv viciae 3841
Rhodobacter capsulatus SB 1003
Rhodobacter sphaeroides 241
Rhodobacter sphaeroides ATCC 17025
Rhodobacter sphaeroides ATCC 17029
Rhodobacter sphaeroides KD131
Rhodococcus equi 103S
Rhodococcus erythropolis PR4
Rhodococcus jostii RHA1
Rhodococcus opacus B4
Rhodoferax ferrireducens T118
Rhodopirellula baltica SH 1
Rhodopseudomonas palustris BisA53
Rhodopseudomonas palustris BisB18
Rhodopseudomonas palustris BisB5
Rhodopseudomonas palustris CGA009
Rhodopseudomonas palustris HaA2
Rhodopseudomonas palustris TIE-1
Rhodospirillum centenum SW
Rhodospirillum rubrum ATCC 11170
Rhodothermus marinus DSM 4252
Rhodothermus marinus SG05JP17-172
Rickettsia africae ESF-5
Rickettsia akari str Hartford
Rickettsia bellii OSU 85-389
Rickettsia bellii RML369-C
Rickettsia canadensis str McKiel
Rickettsia conorii str Malish 7
Rickettsia felis URRWXCal2
Rickettsia heilongjiangensis 054
Rickettsia japonica YH
Rickettsia massiliae MTU5
Rickettsia peacockii str Rustic
Rickettsia prowazekii str Madrid E
Rickettsia rickettsii str Iowa
Rickettsia rickettsii str Sheila Smith
Rickettsia typhi str Wilmington
Riemerella anatipestifer DSM 15868
Robiginitalea biformata HTCC2501
Roseburia hominis A2-183
Roseiflexus castenholzii DSM 13941
Roseiflexus sp RS-1
Roseobacter denitrificans OCh 114
Rothia mucilaginosa DY-18
Rubrobacter xylanophilus DSM 9941
Ruegeria pomeroyi DSS-3
Ruegeria sp TM1040
Runella slithyformis DSM 19594
Saccharomonospora viridis DSM 43017
Saccharophagus degradans 2-40
Saccharopolyspora erythraea NRRL 2338
Salinibacter ruber DSM 13855
Salinibacter ruber M8
Salinispora arenicola CNS-205
Salinispora tropica CNB-440
Salmonella bongori NCTC 12419
Salmonella enterica subsp arizonae serovar 62_z4_z23_ str RSK2980
Salmonella enterica subsp enterica serovar Agona str SL483
Salmonella enterica subsp enterica serovar Choleraesuis str SC-B67
Salmonella enterica subsp enterica serovar Dublin str CT_02021853
Salmonella enterica subsp enterica serovar Enteritidis str P125109
Salmonella enterica subsp enterica serovar Gallinarum str 287_91
Salmonella enterica subsp enterica serovar Heidelberg str SL476
Salmonella enterica subsp enterica serovar Newport str SL254
Salmonella enterica subsp enterica serovar Paratyphi A str AKU_12601
Salmonella enterica subsp enterica serovar Paratyphi A str ATCC 9150
Salmonella enterica subsp enterica serovar Paratyphi B str SPB7
Salmonella enterica subsp enterica serovar Paratyphi C strain RKS4594
Salmonella enterica subsp enterica serovar Schwarzengrund str CVM19633
Salmonella enterica subsp enterica serovar Typhi str CT18
Salmonella enterica subsp enterica serovar Typhi str Ty2
Salmonella enterica subsp enterica serovar Typhimurium str LT2
Sanguibacter keddieii DSM 10542
Sebaldella termitidis ATCC 33386
Segniliparus rotundus DSM 44985
Serratia proteamaculans 568
Serratia sp AS12
Serratia sp AS9
Shewanella amazonensis SB2B
Shewanella baltica OS155
Shewanella baltica OS185
Shewanella baltica OS195
Shewanella baltica OS223
Shewanella denitrificans OS217
Shewanella frigidimarina NCIMB 400
Shewanella halifaxensis HAW-EB4
Shewanella loihica PV-4
Shewanella oneidensis MR-1
Shewanella pealeana ATCC 700345
Shewanella piezotolerans WP3
Shewanella putrefaciens CN-32
Shewanella sediminis HAW-EB3
Shewanella sp ANA-3
Shewanella sp MR-4
Shewanella sp MR-7
Shewanella sp W3-18-1
Shewanella violacea DSS12
Shewanella woodyi ATCC 51908
Shigella boydii CDC 3083-94
Shigella boydii Sb227
Shigella dysenteriae Sd197
Shigella flexneri 2a str 2457T
Shigella flexneri 2a str 301
Shigella flexneri 5 str 8401
Shigella sonnei Ss046
Sideroxydans lithotrophicus ES-1
Simkania negevensis Z
Sinorhizobium fredii NGR234
Sinorhizobium medicae WSM419
Sinorhizobium meliloti 1021
Slackia heliotrinireducens DSM 20476
Sodalis glossinidius str morsitans
Sorangium cellulosum So ce 56
Sphaerobacter thermophilus DSM 20745
Sphingobacterium sp 21
Sphingobium japonicum UT26S
Sphingobium sp SYK-6
Sphingomonas wittichii RW1
Sphingopyxis alaskensis RB2256
Spirochaeta caldaria DSM 7334
Spirochaeta coccoides DSM 17374
Spirochaeta smaragdinae DSM 11293
Spirochaeta sp Buddy
Spirochaeta thermophila DSM 6192
Spirosoma linguale DSM 74
Stackebrandtia nassauensis DSM 44728
Staphylococcus aureus RF122
Staphylococcus aureus subsp aureus COL
Staphylococcus aureus subsp aureus ED98
Staphylococcus aureus subsp aureus JH1
Staphylococcus aureus subsp aureus JH9
Staphylococcus aureus subsp aureus MRSA252
Staphylococcus aureus subsp aureus MSSA476
Staphylococcus aureus subsp aureus Mu3
Staphylococcus aureus subsp aureus Mu50
Staphylococcus aureus subsp aureus MW2
Staphylococcus aureus subsp aureus N315
Staphylococcus aureus subsp aureus NCTC 8325
Staphylococcus aureus subsp aureus str Newman
Staphylococcus aureus subsp aureus USA300_FPR3757
Staphylococcus aureus subsp aureus USA300_TCH1516
Staphylococcus carnosus subsp carnosus TM300
Staphylococcus epidermidis ATCC 12228
Staphylococcus epidermidis RP62A
Staphylococcus haemolyticus JCSC1435
Staphylococcus lugdunensis HKU09-01
Staphylococcus pseudintermedius HKU10-03
Staphylococcus saprophyticus subsp saprophyticus ATCC 15305
Staphylothermus marinus F1
Stenotrophomonas maltophilia JV3
Stenotrophomonas maltophilia K279a
Stenotrophomonas maltophilia R551-3
Streptobacillus moniliformis DSM 12112
Streptococcus agalactiae 2603V_R
Streptococcus agalactiae A909
Streptococcus agalactiae NEM316
Streptococcus dysgalactiae subsp equisimilis GGS_124
Streptococcus equi subsp equi 4047
Streptococcus equi subsp zooepidemicus
Streptococcus equi subsp zooepidemicus MGCS10565
Streptococcus gallolyticus subsp gallolyticus ATCC BAA-2069
Streptococcus gallolyticus UCN34
Streptococcus gordonii str Challis substr CH1
Streptococcus mitis B6
Streptococcus mutans NN2025
Streptococcus mutans UA159
Streptococcus oralis Uo5
Streptococcus parasanguinis ATCC 15912
Streptococcus parauberis KCTC 11537
Streptococcus pasteurianus ATCC 43144
Streptococcus pneumoniae 670-6B
Streptococcus pneumoniae 70585
Streptococcus pneumoniae AP200
Streptococcus pneumoniae ATCC 700669
Streptococcus pneumoniae CGSP14
Streptococcus pneumoniae D39
Streptococcus pneumoniae G54
Streptococcus pneumoniae Hungary19A-6
Streptococcus pneumoniae JJA
Streptococcus pneumoniae P1031
Streptococcus pneumoniae R6
Streptococcus pneumoniae Taiwan19F-14
Streptococcus pneumoniae TCH8431_19A
Streptococcus pneumoniae TIGR4
Streptococcus pseudopneumoniae IS7493
Streptococcus pyogenes M1 GAS
Streptococcus pyogenes MGAS10270
Streptococcus pyogenes MGAS10394
Streptococcus pyogenes MGAS10750
Streptococcus pyogenes MGAS2096
Streptococcus pyogenes MGAS315
Streptococcus pyogenes MGAS5005
Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS8232
Streptococcus pyogenes MGAS9429
Streptococcus pyogenes NZ131
Streptococcus pyogenes SSI-1
Streptococcus pyogenes str Manfredo
Streptococcus salivarius CCHSS3
Streptococcus sanguinis SK36
Streptococcus suis 05ZYH33
Streptococcus suis 98HAH33
Streptococcus suis BM407
Streptococcus suis P1_7
Streptococcus suis SC84
Streptococcus suis ST3
Streptococcus thermophilus CNRZ1066
Streptococcus thermophilus LMD-9
Streptococcus thermophilus LMG 18311
Streptococcus uberis 0140J
Streptomyces avermitilis MA-4680
Streptomyces coelicolor A32
Streptomyces griseus subsp griseus NBRC 13350
Streptomyces scabiei 8722
Streptomyces sp SirexAA-E
Streptosporangium roseum DSM 43021
Sulfobacillus acidophilus TPY
Sulfolobus acidocaldarius DSM 639
Sulfolobus islandicus LD85
Sulfolobus islandicus LS215
Sulfolobus islandicus M1425
Sulfolobus islandicus M1627
Sulfolobus islandicus M164
Sulfolobus islandicus YG5714
Sulfolobus islandicus YN1551
Sulfolobus solfataricus P2
Sulfolobus tokodaii str 7
Sulfuricurvum kujiense DSM 16994
Sulfurihydrogenibium azorense Az-Fu1
Sulfurihydrogenibium sp YO3AOP1
Sulfurimonas autotrophica DSM 16294
Sulfurimonas denitrificans DSM 1251
Sulfurospirillum deleyianum DSM 6946
Sulfurovum sp NBC37-1
Symbiobacterium thermophilum IAM 14863
Synechococcus elongatus PCC 6301
Synechococcus elongatus PCC 7942
Synechococcus sp CC9311
Synechococcus sp CC9605
Synechococcus sp CC9902
Synechococcus sp JA-2-3Ba2-13
Synechococcus sp JA-3-3Ab
Synechococcus sp PCC 7002
Synechococcus sp RCC307
Synechococcus sp WH 7803
Synechococcus sp WH 8102
Synechocystis sp PCC 6803
Syntrophobacter fumaroxidans MPOB
Syntrophobotulus glycolicus DSM 8271
Syntrophomonas wolfei subsp wolfei str Goettingen
Syntrophothermus lipocalidus DSM 12680
Syntrophus aciditrophicus SB
Taylorella asinigenitalis MCE3
Taylorella equigenitalis MCE9
Tepidanaerobacter sp Re1
Teredinibacter turnerae T7901
Tetragenococcus halophilus NBRC 12172
Thauera sp MZ1T
Thermaerobacter marianensis DSM 12885
Thermanaerovibrio acidaminovorans DSM 6589
Thermincola potens JR
Thermoanaerobacter italicus Ab9
Thermoanaerobacter mathranii subsp mathranii str A3
Thermoanaerobacter pseudethanolicus ATCC 33223
Thermoanaerobacter sp X513
Thermoanaerobacter sp X514
Thermoanaerobacter tengcongensis MB4
Thermoanaerobacterium thermosaccharolyticum DSM 571
Thermobaculum terrenum ATCC BAA-798
Thermobifida fusca YX
Thermobispora bispora DSM 43833
Thermococcus gammatolerans EJ3
Thermococcus kodakarensis KOD1
Thermococcus onnurineus NA1
Thermococcus sibiricus MM 739
Thermococcus sp 4557
Thermocrinis albus DSM 14484
Thermodesulfatator indicus DSM 15286
Thermodesulfobacterium sp OPB45
Thermodesulfobium narugense DSM 14796
Thermodesulfovibrio yellowstonii DSM 11347
Thermofilum pendens Hrk 5
Thermomicrobium roseum DSM 5159
Thermomonospora curvata DSM 43183
Thermoplasma acidophilum DSM 1728
Thermoplasma volcanium GSS1
Thermoproteus neutrophilus V24Sta
Thermoproteus tenax Kra 1
Thermoproteus uzoniensis 768-20
Thermosediminibacter oceani DSM 16646
Thermosipho africanus TCF52B
Thermosipho melanesiensis BI429
Thermosphaera aggregans DSM 11486
Thermosynechococcus elongatus BP-1
Thermotoga lettingae TMO
Thermotoga maritima MSB8
Thermotoga naphthophila RKU-10
Thermotoga neapolitana DSM 4359
Thermotoga petrophila RKU-1
Thermotoga sp RQ2
Thermotoga thermarum DSM 5069
Thermovibrio ammonificans HB-1
Thermus scotoductus SA-01
Thermus thermophilus HB27
Thermus thermophilus HB8
Thioalkalimicrobium cyclicum ALM1
Thioalkalivibrio sp K90mix
Thioalkalivibrio sulfidophilus HL-EbGr7
Thiobacillus denitrificans ATCC 25259
Thiomicrospira crunogena XCL-2
Thiomonas intermedia K12
Tolumonas auensis DSM 9187
Treponema azotonutricium ZAS-9
Treponema brennaborense DSM 12168
Treponema denticola ATCC 35405
Treponema pallidum subsp pallidum SS14
Treponema pallidum subsp pallidum str Nichols
Treponema paraluiscuniculi Cuniculi A
Treponema primitia ZAS-2
Treponema succinifaciens DSM 2489
Trichodesmium erythraeum IMS101
Tropheryma whipplei str Twist
Tropheryma whipplei TW08_27
Truepera radiovictrix DSM 17093
Tsukamurella paurometabola DSM 20162
uncultured methanogenic archaeon RC-I
Ureaplasma parvum serovar 3 str ATCC 27815
Ureaplasma parvum serovar 3 str ATCC 700970
Ureaplasma urealyticum serovar 10 str ATCC 33699
Variovorax paradoxus EPS
Variovorax paradoxus S110
Veillonella parvula DSM 2008
Verminephrobacter eiseniae EF01-2
Verrucosispora maris AB-18-032
Vibrio anguillarum 775
Vibrio cholerae M66-2
Vibrio cholerae MJ-1236
Vibrio cholerae O1 biovar El Tor str N16961
Vibrio cholerae O395
Vibrio fischeri ES114
Vibrio fischeri MJ11
Vibrio harveyi ATCC BAA-1116
Vibrio parahaemolyticus RIMD 2210633
Vibrio sp Ex25
Vibrio splendidus LGP32
Vibrio vulnificus CMCP6
Vibrio vulnificus MO6-24_O
Vibrio vulnificus YJ016
Vulcanisaeta distributa DSM 14429
Vulcanisaeta moutnovskia 768-28
Waddlia chondrophila WSU 86-1044
Weeksella virosa DSM 16922
Weissella koreensis KACC 15510
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
Wolbachia endosymbiont of Culex quinquefasciatus Pel
Wolbachia endosymbiont of Drosophila melanogaster
Wolbachia endosymbiont strain TRS of Brugia malayi
Wolbachia sp wRi
Wolinella succinogenes DSM 1740
Xanthobacter autotrophicus Py2
Xanthomonas albilineans GPE PC73
Xanthomonas axonopodis pv citri str 306
Xanthomonas axonopodis pv citrumelo F1
Xanthomonas campestris pv campestris str 8004
Xanthomonas campestris pv campestris str ATCC 33913
Xanthomonas campestris pv campestris str B100
Xanthomonas campestris pv vesicatoria str 85-10
Xanthomonas oryzae pv oryzae KACC10331
Xanthomonas oryzae pv oryzae MAFF 311018
Xanthomonas oryzae pv oryzae PXO99A
Xenorhabdus bovienii SS-2004
Xenorhabdus nematophila ATCC 19061
Xylanimonas cellulosilytica DSM 15894
Xylella fastidiosa 9a5c
Xylella fastidiosa M12
Xylella fastidiosa M23
Xylella fastidiosa Temecula1
Yersinia enterocolitica subsp enterocolitica 8081
Yersinia enterocolitica subsp palearctica 1055Rr
Yersinia pestis Angola
Yersinia pestis Antiqua
Yersinia pestis biovar Microtus str 91001
Yersinia pestis CO92
Yersinia pestis KIM10plus
Yersinia pestis Nepal516
Yersinia pestis Pestoides F
Yersinia pestis Z176003
Yersinia pseudotuberculosis IP 31758
Yersinia pseudotuberculosis IP 32953
Yersinia pseudotuberculosis PB1_plus
Yersinia pseudotuberculosis YPIII
Zobellia galactanivorans
Zunongwangia profunda SM-A87
Zymomonas mobilis subsp mobilis NCIMB 11163
Zymomonas mobilis subsp mobilis ZM4
Zymomonas mobilis subsp pomaceae ATCC 29192
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Acaryochloris marina MBIC11017
Acetobacter pasteurianus IFO 3283-01
Acetohalobium arabaticum DSM 5501
Acholeplasma laidlawii PG-8A
Achromobacter xylosoxidans A8
Acidaminococcus fermentans DSM 20731
Acidaminococcus intestini RyC-MR95
Acidianus hospitalis W1
Acidilobus saccharovorans 345-15
Acidimicrobium ferrooxidans DSM 10331
Acidiphilium cryptum JF-5
Acidiphilium multivorum AIU301
Acidithiobacillus caldus SM-1
Acidithiobacillus ferrivorans SS3
Acidithiobacillus ferrooxidans ATCC 23270
Acidithiobacillus ferrooxidans ATCC 53993
Acidobacterium capsulatum ATCC 51196
Acidothermus cellulolyticus 11B
Acidovorax citrulli AAC00-1
Acidovorax ebreus TPSY
Acidovorax sp JS42
Aciduliprofundum boonei T469
Acinetobacter baumannii AB0057
Acinetobacter baumannii AB307-0294
Acinetobacter baumannii ACICU
Acinetobacter baumannii ATCC 17978
Acinetobacter baumannii AYE
Acinetobacter baumannii SDF
Acinetobacter sp ADP1
Acinetobacter sp DR1
Actinobacillus pleuropneumoniae serovar 3 str JL03
Actinobacillus pleuropneumoniae serovar 5b str L20
Actinobacillus pleuropneumoniae serovar 7 str AP76
Actinobacillus succinogenes 130Z
Actinosynnema mirum DSM 43827
Aerococcus urinae ACS-120-V-Col10a
Aeromonas hydrophila subsp hydrophila ATCC 7966
Aeromonas salmonicida subsp salmonicida A449
Aeromonas veronii B565
Aeropyrum pernix K1
Aggregatibacter actinomycetemcomitans D11S-1
Aggregatibacter aphrophilus NJ8700
Aggregatibacter phage S1249
Agrobacterium radiobacter K84
Agrobacterium sp H13-3
Agrobacterium tumefaciens str C58
Agrobacterium vitis S4
Akkermansia muciniphila ATCC BAA-835
Alcanivorax borkumensis SK2
Alicycliphilus denitrificans K601
Alicyclobacillus acidocaldarius subsp acidocaldarius DSM 446
Aliivibrio salmonicida LFI1238
Alkalilimnicola ehrlichii MLHE-1
Alkaliphilus metalliredigens QYMF
Alkaliphilus oremlandii OhILAs
Allochromatium vinosum DSM 180
Alteromonas macleodii str Deep ecotype
Alteromonas sp SN2
Aminobacterium colombiense DSM 12261
Ammonifex degensii KC4
Amycolatopsis mediterranei U32
Amycolicicoccus subflavus DQS3-9A1
Anabaena variabilis ATCC 29413
Anaerococcus prevotii DSM 20548
Anaerolinea thermophila UNI-1
Anaeromyxobacter dehalogenans 2CP-1
Anaeromyxobacter dehalogenans 2CP-C
Anaeromyxobacter sp Fw109-5
Anaeromyxobacter sp K
Anaplasma centrale str Israel
Anaplasma marginale str Florida
Anaplasma marginale str St Maries
Anaplasma phagocytophilum HZ
Anoxybacillus flavithermus WK1
Aquifex aeolicus VF5
Arcanobacterium haemolyticum DSM 20595
Archaeoglobus fulgidus DSM 4304
Archaeoglobus profundus DSM 5631
Archaeoglobus veneficus SNP6
Arcobacter butzleri RM4018
Arcobacter nitrofigilis DSM 7299
Aromatoleum aromaticum EbN1
Arthrobacter arilaitensis Re117
Arthrobacter aurescens TC1
Arthrobacter chlorophenolicus A6
Arthrobacter phenanthrenivorans Sphe3
Arthrobacter sp FB24
Aster yellows witches-broom phytoplasma AYWB
Atopobium parvulum DSM 20469
Azoarcus sp BH72
Azorhizobium caulinodans ORS 571
Azospirillum sp B510
Azotobacter vinelandii DJ
Bacillus amyloliquefaciens DSM 7
Bacillus amyloliquefaciens FZB42
Bacillus anthracis str A0248
Bacillus anthracis str Ames
Bacillus anthracis str Ames Ancestor
Bacillus anthracis str CDC 684
Bacillus anthracis str Sterne
Bacillus atrophaeus 1942
Bacillus cereus 03BB102
Bacillus cereus AH187
Bacillus cereus AH820
Bacillus cereus ATCC 10987
Bacillus cereus ATCC 14579
Bacillus cereus B4264
Bacillus cereus biovar anthracis str CI
Bacillus cereus E33L
Bacillus cereus G9842
Bacillus cereus Q1
Bacillus clausii KSM-K16
Bacillus coagulans 2-6
Bacillus cytotoxicus NVH 391-98
Bacillus halodurans C-125
Bacillus licheniformis ATCC 14580
Bacillus megaterium DSM 319
Bacillus megaterium QM B1551
Bacillus pseudofirmus OF4
Bacillus pumilus SAFR-032
Bacillus selenitireducens MLS10
Bacillus subtilis BSn5
Bacillus subtilis subsp spizizenii str W23
Bacillus subtilis subsp spizizenii TU-B-10
Bacillus subtilis subsp subtilis str 168
Bacillus thuringiensis BMB171
Bacillus thuringiensis serovar konkukian str 97-27
Bacillus thuringiensis str Al Hakam
Bacillus tusciae DSM 2912
Bacillus weihenstephanensis KBAB4
Bacteroides fragilis NCTC 9343
Bacteroides fragilis YCH46
Bacteroides helcogenes P 36-108
Bacteroides salanitronis DSM 18170
Bacteroides thetaiotaomicron VPI-5482
Bacteroides vulgatus ATCC 8482
Bartonella bacilliformis KC583
Bartonella clarridgeiae 73
Bartonella grahamii as4aup
Bartonella henselae str Houston-1
Bartonella quintana str Toulouse
Bartonella tribocorum CIP 105476
Baumannia cicadellinicola str Hc
Bdellovibrio bacteriovorus HD100
Beijerinckia indica subsp indica ATCC 9039
Beutenbergia cavernae DSM 12333
Bifidobacterium adolescentis ATCC 15703
Bifidobacterium animalis subsp lactis AD011
Bifidobacterium animalis subsp lactis Bl-04
Bifidobacterium animalis subsp lactis DSM 10140
Bifidobacterium bifidum PRL2010
Bifidobacterium bifidum S17
Bifidobacterium dentium Bd1
Bifidobacterium longum DJO10A
Bifidobacterium longum NCC2705
Bifidobacterium longum subsp infantis 157F
Bifidobacterium longum subsp infantis ATCC 15697
Bifidobacterium longum subsp longum BBMN68
Bifidobacterium longum subsp longum JCM 1217
Bifidobacterium longum subsp longum JDM301
Blattabacterium sp Blattella germanica str Bge
Blattabacterium sp Periplaneta americana str BPLAN
Bordetella avium 197N
Bordetella bronchiseptica RB50
Bordetella parapertussis 12822
Bordetella pertussis Tohama I
Bordetella petrii DSM 12804
Borrelia afzelii PKo
Borrelia bissettii DN127
Borrelia burgdorferi B31
Borrelia burgdorferi ZS7
Borrelia duttonii Ly
Borrelia garinii PBi
Borrelia hermsii DAH
Borrelia recurrentis A1
Borrelia turicatae 91E135
Brachybacterium faecium DSM 4810
Brachyspira hyodysenteriae WA1
Brachyspira murdochii DSM 12563
Brachyspira pilosicoli 95_1000
Bradyrhizobium japonicum USDA 110
Bradyrhizobium sp BTAi1
Bradyrhizobium sp ORS 278
Brevibacillus brevis NBRC 100599
Brucella abortus bv 1 str 9-941
Brucella abortus S19
Brucella canis ATCC 23365
Brucella melitensis ATCC 23457
Brucella melitensis biovar Abortus 2308
Brucella melitensis bv 1 str 16M
Brucella microti CCM 4915
Brucella ovis ATCC 25840
Brucella pinnipedialis B2_94
Brucella suis 1330
Brucella suis ATCC 23445
Buchnera aphidicola Cinara tujafilina
Buchnera aphidicola str 5A Acyrthosiphon pisum
Buchnera aphidicola str APS Acyrthosiphon pisum
Buchnera aphidicola str Bp Baizongia pistaciae
Buchnera aphidicola str Cc Cinara cedri
Buchnera aphidicola str Sg Schizaphis graminum
Buchnera aphidicola str Tuc7 Acyrthosiphon pisum
Burkholderia ambifaria AMMD
Burkholderia ambifaria MC40-6
Burkholderia cenocepacia AU 1054
Burkholderia cenocepacia HI2424
Burkholderia cenocepacia J2315
Burkholderia cenocepacia MC0-3
Burkholderia gladioli BSR3
Burkholderia glumae BGR1
Burkholderia mallei ATCC 23344
Burkholderia mallei NCTC 10229
Burkholderia mallei NCTC 10247
Burkholderia mallei SAVP1
Burkholderia multivorans ATCC 17616
Burkholderia multivorans ATCC 17616
Burkholderia phymatum STM815
Burkholderia phytofirmans PsJN
Burkholderia pseudomallei 1106a
Burkholderia pseudomallei 1710b
Burkholderia pseudomallei 668
Burkholderia pseudomallei K96243
Burkholderia rhizoxinica HKI 454
Burkholderia sp 383
Burkholderia thailandensis E264
Burkholderia vietnamiensis G4
Burkholderia xenovorans LB400
Butyrivibrio proteoclasticus B316
Caldicellulosiruptor bescii DSM 6725
Caldicellulosiruptor hydrothermalis 108
Caldicellulosiruptor kristjanssonii 177R1B
Caldicellulosiruptor kronotskyensis 2002
Caldicellulosiruptor obsidiansis OB47
Caldicellulosiruptor owensensis OL
Caldicellulosiruptor saccharolyticus DSM 8903
Calditerrivibrio nitroreducens DSM 19672
Caldivirga maquilingensis IC-167
Campylobacter concisus 13826
Campylobacter curvus 52592
Campylobacter fetus subsp fetus 82-40
Campylobacter hominis ATCC BAA-381
Campylobacter jejuni RM1221
Campylobacter jejuni subsp doylei 26997
Campylobacter jejuni subsp jejuni 81116
Campylobacter jejuni subsp jejuni 81-176
Campylobacter jejuni subsp jejuni ICDCCJ07001
Campylobacter jejuni subsp jejuni NCTC 11168
Campylobacter lari RM2100
Candidatus Accumulibacter phosphatis clade IIA str UW-1
Candidatus Amoebophilus asiaticus 5a2
Candidatus Arthromitus sp SFB-mouse-Japan
Candidatus Arthromitus sp SFB-rat-Yit
Candidatus Azobacteroides pseudotrichonymphae genomovar CFP2
Candidatus Blochmannia floridanus
Candidatus Blochmannia pennsylvanicus str BPEN
Candidatus Blochmannia vafer str BVAF
Candidatus Carsonella ruddii PV
Candidatus Chloracidobacterium thermophilum B
Candidatus Desulforudis audaxviator MP104C
Candidatus Hamiltonella defensa 5AT Acyrthosiphon pisum
Candidatus Hodgkinia cicadicola Dsem
Candidatus Korarchaeum cryptofilum OPF8
Candidatus Koribacter versatilis Ellin345
Candidatus Liberibacter asiaticus str psy62
Candidatus Liberibacter solanacearum CLso-ZC1
Candidatus Midichloria mitochondrii IricVA
Candidatus Moranella endobia PCIT
Candidatus Nitrospira defluvii
Candidatus Pelagibacter sp IMCC9063
Candidatus Pelagibacter ubique HTCC1062
Candidatus Phytoplasma australiense
Candidatus Phytoplasma mali
Candidatus Protochlamydia amoebophila UWE25
Candidatus Puniceispirillum marinum IMCC1322
Candidatus Riesia pediculicola USDA
Candidatus Ruthia magnifica str Cm Calyptogena magnifica
Candidatus Solibacter usitatus Ellin6076
Candidatus Sulcia muelleri CARI
Candidatus Sulcia muelleri DMIN
Candidatus Sulcia muelleri GWSS
Candidatus Sulcia muelleri SMDSEM
Candidatus Tremblaya princeps PCIT
Candidatus Vesicomyosocius okutanii HA
Candidatus Zinderia insecticola CARI
Capnocytophaga canimorsus Cc5
Capnocytophaga ochracea DSM 7271
Carboxydothermus hydrogenoformans Z-2901
Carnobacterium sp 17-4
Catenulispora acidiphila DSM 44928
Caulobacter crescentus CB15
Caulobacter crescentus NA1000
Caulobacter sp K31
Cellulomonas fimi ATCC 484
Cellulomonas flavigena DSM 20109
Cellulophaga algicola DSM 14237
Cellulophaga lytica DSM 7489
Cellvibrio gilvus ATCC 13127
Cellvibrio japonicus Ueda107
Cenarchaeum symbiosum A
Chelativorans sp BNC1
Chitinophaga pinensis DSM 2588
Chlamydia muridarum Nigg
Chlamydia trachomatis 434_Bu
Chlamydia trachomatis A_HAR-13
Chlamydia trachomatis B_Jali20_OT
Chlamydia trachomatis B_TZ1A828_OT
Chlamydia trachomatis D_UW-3_CX
Chlamydia trachomatis L2b_UCH-1_proctitis
Chlamydia trachomatis L2c
Chlamydophila abortus S26_3
Chlamydophila caviae GPIC
Chlamydophila felis Fe_C-56
Chlamydophila pecorum E58
Chlamydophila pneumoniae AR39
Chlamydophila pneumoniae CWL029
Chlamydophila pneumoniae J138
Chlamydophila pneumoniae TW-183
Chlamydophila psittaci 6BC
Chlorobaculum parvum NCIB 8327
Chlorobium chlorochromatii CaD3
Chlorobium limicola DSM 245
Chlorobium luteolum DSM 273
Chlorobium phaeobacteroides BS1
Chlorobium phaeobacteroides DSM 266
Chlorobium phaeovibrioides DSM 265
Chlorobium tepidum TLS
Chloroflexus aggregans DSM 9485
Chloroflexus aurantiacus J-10-fl
Chloroflexus sp Y-400-fl
Chloroherpeton thalassium ATCC 35110
Chromobacterium violaceum ATCC 12472
Chromohalobacter salexigens DSM 3043
Citrobacter koseri ATCC BAA-895
Citrobacter rodentium ICC168
Clavibacter michiganensis subsp michiganensis NCPPB 382
Clavibacter michiganensis subsp sepedonicus
Clostridiales genomosp BVAB3 str UPII9-5
Clostridium acetobutylicum ATCC 824
Clostridium acetobutylicum DSM 1731
Clostridium beijerinckii NCIMB 8052
Clostridium botulinum A str ATCC 19397
Clostridium botulinum A str ATCC 3502
Clostridium botulinum A str Hall
Clostridium botulinum A2 str Kyoto
Clostridium botulinum A3 str Loch Maree
Clostridium botulinum B str Eklund 17B
Clostridium botulinum B1 str Okra
Clostridium botulinum Ba4 str 657
Clostridium botulinum BKT015925
Clostridium botulinum E3 str Alaska E43
Clostridium botulinum F str Langeland
Clostridium cellulolyticum H10
Clostridium cellulovorans 743B
Clostridium difficile 630
Clostridium difficile CD196
Clostridium difficile R20291
Clostridium kluyveri DSM 555
Clostridium kluyveri NBRC 12016
Clostridium ljungdahlii DSM 13528
Clostridium novyi NT
Clostridium perfringens ATCC 13124
Clostridium perfringens str 13
Clostridium phytofermentans ISDg
Clostridium saccharolyticum WM1
Clostridium sp SY8519
Clostridium sticklandii DSM 519
Clostridium tetani E88
Clostridium thermocellum ATCC 27405
Collimonas fungivorans Ter331
Colwellia psychrerythraea 34H
Comamonas testosteroni CNB-2
Conexibacter woesei DSM 14684
Coprothermobacter proteolyticus DSM 5265
Coraliomargarita akajimensis DSM 45221
Coriobacterium glomerans PW2
Corynebacterium aurimucosum ATCC 700975
Corynebacterium diphtheriae NCTC 13129
Corynebacterium efficiens YS-314
Corynebacterium glutamicum ATCC 13032
Corynebacterium glutamicum R
Corynebacterium jeikeium K411
Corynebacterium kroppenstedtii DSM 44385
Corynebacterium pseudotuberculosis FRC41
Corynebacterium ulcerans BR-AD22
Corynebacterium urealyticum DSM 7109
Corynebacterium variabile DSM 44702
Coxiella burnetii CbuG_Q212
Coxiella burnetii CbuK_Q154
Coxiella burnetii Dugway 5J108-111
Coxiella burnetii RSA 331
Coxiella burnetii RSA 493
Croceibacter atlanticus HTCC2559
Cronobacter sakazakii ATCC BAA-894
Cronobacter turicensis z3032
Cryptobacterium curtum DSM 15641
Cupriavidus metallidurans CH34
Cupriavidus necator N-1
Cupriavidus taiwanensis LMG 19424
cyanobacterium UCYN-A
Cyanothece sp ATCC 51142
Cyanothece sp PCC 7424
Cyanothece sp PCC 7425
Cyanothece sp PCC 7822
Cyanothece sp PCC 8801
Cyanothece sp PCC 8802
Cyclobacterium marinum DSM 745
Cytophaga hutchinsonii ATCC 33406
Dechloromonas aromatica RCB
Deferribacter desulfuricans SSM1
Dehalococcoides ethenogenes 195
Dehalococcoides sp BAV1
Dehalococcoides sp CBDB1
Dehalococcoides sp GT
Dehalococcoides sp VS
Deinococcus deserti VCD115
Deinococcus geothermalis DSM 11300
Deinococcus maricopensis DSM 21211
Deinococcus proteolyticus MRP
Deinococcus radiodurans R1
Delftia acidovorans SPH-1
Delftia sp Cs1-4
Denitrovibrio acetiphilus DSM 12809
Desulfarculus baarsii DSM 2075
Desulfatibacillum alkenivorans AK-01
Desulfitobacterium hafniense DCB-2
Desulfitobacterium hafniense Y51
Desulfobacca acetoxidans DSM 11109
Desulfobacterium autotrophicum HRM2
Desulfobulbus propionicus DSM 2032
Desulfococcus oleovorans Hxd3
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028
Desulfotalea psychrophila LSv54
Desulfotomaculum acetoxidans DSM 771
Desulfotomaculum carboxydivorans CO-1-SRB
Desulfotomaculum kuznetsovii DSM 6115
Desulfotomaculum reducens MI-1
Desulfotomaculum ruminis DSM 2154
Desulfovibrio alaskensis G20
Desulfovibrio desulfuricans subsp desulfuricans str ATCC 27774
Desulfovibrio magneticus RS-1
Desulfovibrio salexigens DSM 2638
Desulfovibrio vulgaris DP4
Desulfovibrio vulgaris str Hildenborough
Desulfovibrio vulgaris str Miyazaki F
Desulfurivibrio alkaliphilus AHT2
Desulfurobacterium thermolithotrophum DSM 11699
Desulfurococcus kamchatkensis 1221n
Desulfurococcus mucosus DSM 2162
Dichelobacter nodosus VCS1703A
Dickeya dadantii 3937
Dickeya dadantii Ech586
Dickeya dadantii Ech703
Dickeya zeae Ech1591
Dictyoglomus thermophilum H-6-12
Dictyoglomus turgidum DSM 6724
Dinoroseobacter shibae DFL 12
Dyadobacter fermentans DSM 18053
Edwardsiella ictaluri 93-146
Edwardsiella tarda EIB202
Eggerthella lenta DSM 2243
Eggerthella sp YY7918
Ehrlichia canis str Jake
Ehrlichia chaffeensis str Arkansas
Ehrlichia ruminantium str Gardel
Ehrlichia ruminantium str Welgevonden
Elusimicrobium minutum Pei191
Enterobacter aerogenes KCTC 2190
Enterobacter asburiae LF7a
Enterobacter cloacae SCF1
Enterobacter cloacae subsp cloacae ATCC 13047
Enterobacter sp 638
Enterococcus faecalis V583
Erwinia amylovora ATCC 49946
Erwinia amylovora CFBP1430
Erwinia billingiae Eb661
Erwinia pyrifoliae Ep1_96
Erwinia tasmaniensis Et1_99
Erysipelothrix rhusiopathiae str Fujisawa
Erythrobacter litoralis HTCC2594
Escherichia coli 536
Escherichia coli 55989
Escherichia coli APEC O1
Escherichia coli ATCC 8739
Escherichia coli B str REL606
Escherichia coli BL21-GoldDE3pLysS AG
Escherichia coli BW2952
Escherichia coli CFT073
Escherichia coli E24377A
Escherichia coli ED1a
Escherichia coli HS
Escherichia coli IAI1
Escherichia coli IAI39
Escherichia coli O103_H2 str 12009
Escherichia coli O111_H- str 11128
Escherichia coli O127_H6 str E2348_69
Escherichia coli O157_H7 str EC4115
Escherichia coli O157_H7 str EDL933
Escherichia coli O157_H7 str Sakai
Escherichia coli O157_H7 str TW14359
Escherichia coli O26_H11 str 11368
Escherichia coli O55_H7 str CB9615
Escherichia coli S88
Escherichia coli SE11
Escherichia coli SMS-3-5
Escherichia coli str K-12 substr DH10B
Escherichia coli str K-12 substr MG1655
Escherichia coli UMN026
Escherichia coli UTI89
Escherichia fergusonii ATCC 35469
Eubacterium eligens ATCC 27750
Eubacterium limosum KIST612
Eubacterium rectale ATCC 33656
Exiguobacterium sibiricum 255-15
Exiguobacterium sp AT1b
Ferrimonas balearica DSM 9799
Ferroglobus placidus DSM 10642
Fervidobacterium nodosum Rt17-B1
Fibrobacter succinogenes subsp succinogenes S85
Finegoldia magna ATCC 29328
Flavobacteriaceae bacterium 3519-10
Flavobacterium branchiophilum FL-15
Flavobacterium johnsoniae UW101
Flavobacterium psychrophilum JIP02_86
Flexistipes sinusarabici DSM 4947
Fluviicola taffensis DSM 16823
Francisella novicida U112
Francisella philomiragia subsp philomiragia ATCC 25017
Francisella sp TX077308
Francisella tularensis subsp holarctica FTNF002-00
Francisella tularensis subsp holarctica LVS
Francisella tularensis subsp holarctica OSU18
Francisella tularensis subsp mediasiatica FSC147
Francisella tularensis subsp tularensis FSC198
Francisella tularensis subsp tularensis SCHU S4
Francisella tularensis subsp tularensis WY96-3418
Frankia alni ACN14a
Frankia sp CcI3
Frankia sp EAN1pec
Fusobacterium nucleatum subsp nucleatum ATCC 25586
Gallibacterium anatis UMN179
Gallionella capsiferriformans ES-2
gamma proteobacterium HdN1
Gardnerella vaginalis 409-05
Gemmatimonas aurantiaca T-27
Geobacillus kaustophilus HTA426
Geobacillus sp C56-T3
Geobacillus sp WCH70
Geobacillus sp Y412MC61
Geobacillus thermodenitrificans NG80-2
Geobacillus thermoglucosidasius C56-YS93
Geobacter bemidjiensis Bem
Geobacter lovleyi SZ
Geobacter metallireducens GS-15
Geobacter sp FRC-32
Geobacter sp M21
Geobacter sulfurreducens PCA
Geobacter uraniireducens Rf4
Geodermatophilus obscurus DSM 43160
Glaciecola nitratireducens FR1064
Glaciecola sp 4H-3-7plusYE-5
Gloeobacter violaceus PCC 7421
Gluconacetobacter diazotrophicus PAl 5
Gluconobacter oxydans 621H
Gordonia bronchialis DSM 43247
Gramella forsetii KT0803
Granulibacter bethesdensis CGDNIH1
Haemophilus ducreyi 35000HP
Haemophilus influenzae 86-028NP
Haemophilus influenzae F3031
Haemophilus influenzae F3047
Haemophilus influenzae PittEE
Haemophilus influenzae PittGG
Haemophilus influenzae Rd KW20
Haemophilus parainfluenzae T3T1
Haemophilus parasuis SH0165
Haemophilus somnus 129PT
Haemophilus somnus 2336
Hahella chejuensis KCTC 2396
Halalkalicoccus jeotgali B3
Halanaerobium hydrogeniformans
Haliangium ochraceum DSM 14365
Haliscomenobacter hydrossis DSM 1100
Haloarcula hispanica ATCC 33960
Haloarcula marismortui ATCC 43049
Halobacterium salinarum R1
Halobacterium sp NRC-1
Haloferax volcanii DS2
Halomicrobium mukohataei DSM 12286
Halomonas elongata DSM 2581
halophilic archaeon DL31
Halopiger xanaduensis SH-6
Haloquadratum walsbyi DSM 16790
Halorhabdus utahensis DSM 12940
Halorhodospira halophila SL1
Halorubrum lacusprofundi ATCC 49239
Haloterrigena turkmenica DSM 5511
Halothermothrix orenii H 168
Halothiobacillus neapolitanus c2
Helicobacter acinonychis str Sheeba
Helicobacter bizzozeronii CIII-1
Helicobacter felis ATCC 49179
Helicobacter hepaticus ATCC 51449
Helicobacter mustelae 12198
Helicobacter pylori 26695
Helicobacter pylori B38
Helicobacter pylori B8
Helicobacter pylori G27
Helicobacter pylori HPAG1
Helicobacter pylori J99
Helicobacter pylori P12
Helicobacter pylori PeCan4
Helicobacter pylori Shi470
Helicobacter pylori SJM180
Heliobacterium modesticaldum Ice1
Herbaspirillum seropedicae SmR1
Herminiimonas arsenicoxydans
Herpetosiphon aurantiacus DSM 785
Hippea maritima DSM 10411
Hirschia baltica ATCC 49814
Hydrogenobacter thermophilus TK-6
Hydrogenobaculum sp Y04AAS1
Hyperthermus butylicus DSM 5456
Hyphomicrobium denitrificans ATCC 51888
Hyphomicrobium sp MC1
Hyphomonas neptunium ATCC 15444
Idiomarina loihiensis L2TR
Ignicoccus hospitalis KIN4_I
Ignisphaera aggregans DSM 17230
Ilyobacter polytropus DSM 2926
Intrasporangium calvum DSM 43043
Isoptericola variabilis 225
Isosphaera pallida ATCC 43644
Jannaschia sp CCS1
Janthinobacterium sp Marseille
Jonesia denitrificans DSM 20603
Kangiella koreensis DSM 16069
Ketogulonicigenium vulgare Y25
Kineococcus radiotolerans SRS30216
Klebsiella pneumoniae 342
Klebsiella pneumoniae subsp pneumoniae MGH 78578
Klebsiella pneumoniae subsp pneumoniae NTUH-K2044
Klebsiella variicola At-22
Kocuria rhizophila DC2201
Kosmotoga olearia TBF 1951
Kribbella flavida DSM 17836
Krokinobacter sp 4H-3-7-5
Kytococcus sedentarius DSM 20547
Lacinutrix sp 5H-3-7-4
Lactobacillus acidophilus 30SC
Lactobacillus acidophilus NCFM
Lactobacillus amylovorus GRL 1112
Lactobacillus brevis ATCC 367
Lactobacillus buchneri NRRL B-30929
Lactobacillus casei ATCC 334
Lactobacillus casei BL23
Lactobacillus casei str Zhang
Lactobacillus crispatus ST1
Lactobacillus delbrueckii subsp bulgaricus ATCC 11842
Lactobacillus delbrueckii subsp bulgaricus ATCC BAA-365
Lactobacillus delbrueckii subsp bulgaricus ND02
Lactobacillus fermentum IFO 3956
Lactobacillus gasseri ATCC 33323
Lactobacillus helveticus DPC 4571
Lactobacillus johnsonii FI9785
Lactobacillus johnsonii NCC 533
Lactobacillus kefiranofaciens ZW3
Lactobacillus plantarum JDM1
Lactobacillus plantarum subsp plantarum ST-III
Lactobacillus plantarum WCFS1
Lactobacillus reuteri DSM 20016
Lactobacillus reuteri JCM 1112
Lactobacillus reuteri SD2112
Lactobacillus rhamnosus GG
Lactobacillus rhamnosus Lc 705
Lactobacillus ruminis ATCC 27782
Lactobacillus sakei subsp sakei 23K
Lactobacillus salivarius UCC118
Lactobacillus sanfranciscensis TMW 11304
Lactococcus garvieae ATCC 49156
Lactococcus lactis subsp cremoris MG1363
Lactococcus lactis subsp cremoris SK11
Lactococcus lactis subsp lactis Il1403
Lactococcus lactis subsp lactis KF147
Laribacter hongkongensis HLHK9
Lawsonia intracellularis PHE_MN1-00
Leadbetterella byssophila DSM 17132
Legionella longbeachae NSW150
Legionella pneumophila 2300_99 Alcoy
Legionella pneumophila str Corby
Legionella pneumophila str Lens
Legionella pneumophila str Paris
Legionella pneumophila subsp pneumophila str Philadelphia 1
Leifsonia xyli subsp xyli str CTCB07
Leptospira biflexa serovar Patoc strain Patoc 1 Ames
Leptospira biflexa serovar Patoc strain Patoc 1 Paris
Leptospira borgpetersenii serovar Hardjo-bovis JB197
Leptospira borgpetersenii serovar Hardjo-bovis L550
Leptospira interrogans serovar Copenhageni str Fiocruz L1-130
Leptospira interrogans serovar Lai str 56601
Leptothrix cholodnii SP-6
Leptotrichia buccalis C-1013-b
Leuconostoc citreum KM20
Leuconostoc gasicomitatum LMG 18811
Leuconostoc kimchii IMSNU 11154
Leuconostoc mesenteroides subsp mesenteroides ATCC 8293
Leuconostoc sp C2
Listeria innocua Clip11262
Listeria ivanovii subsp ivanovii PAM 55
Listeria monocytogenes 08-5578
Listeria monocytogenes 08-5923
Listeria monocytogenes EGD-e
Listeria monocytogenes HCC23
Listeria monocytogenes serotype 4b str CLIP 80459
Listeria monocytogenes serotype 4b str F2365
Listeria seeligeri serovar 1_2b str SLCC3954
Listeria welshimeri serovar 6b str SLCC5334
Lysinibacillus sphaericus C3-41
Macrococcus caseolyticus JCSC5402
Magnetococcus sp MC-1
Magnetospirillum magneticum AMB-1
Mahella australiensis 50-1 BON
Mannheimia succiniciproducens MBEL55E
Maribacter sp HTCC2170
Maricaulis maris MCS10
Marinithermus hydrothermalis DSM 14884
Marinobacter aquaeolei VT8
Marinomonas mediterranea MMB-1
Marinomonas posidonica IVIA-Po-181
Marinomonas sp MWYL1
Marivirga tractuosa DSM 4126
Megasphaera elsdenii DSM 20460
Meiothermus ruber DSM 1279
Meiothermus silvanus DSM 9946
Melissococcus plutonius ATCC 35311
Mesoplasma florum L1
Mesorhizobium ciceri biovar biserrulae WSM1271
Mesorhizobium loti MAFF303099
Mesorhizobium opportunistum WSM2075
Metallosphaera cuprina Ar-4
Metallosphaera sedula DSM 5348
Methanobacterium sp AL-21
Methanobacterium sp SWAN-1
Methanobrevibacter ruminantium M1
Methanobrevibacter smithii ATCC 35061
Methanocaldococcus fervens AG86
Methanocaldococcus infernus ME
Methanocaldococcus jannaschii DSM 2661
Methanocaldococcus sp FS406-22
Methanocaldococcus vulcanius M7
Methanocella paludicola SANAE
Methanococcoides burtonii DSM 6242
Methanococcus aeolicus Nankai-3
Methanococcus maripaludis C5
Methanococcus maripaludis C6
Methanococcus maripaludis C7
Methanococcus maripaludis S2
Methanococcus maripaludis X1
Methanococcus vannielii SB
Methanococcus voltae A3
Methanocorpusculum labreanum Z
Methanoculleus marisnigri JR1
Methanohalobium evestigatum Z-7303
Methanohalophilus mahii DSM 5219
Methanoplanus petrolearius DSM 11571
Methanopyrus kandleri AV19
Methanoregula boonei 6A8
Methanosaeta concilii GP6
Methanosaeta thermophila PT
Methanosalsum zhilinae DSM 4017
Methanosarcina acetivorans C2A
Methanosarcina barkeri str Fusaro
Methanosarcina mazei Go1
Methanosphaera stadtmanae DSM 3091
Methanosphaerula palustris E1-9c
Methanospirillum hungatei JF-1
Methanothermobacter marburgensis str Marburg
Methanothermobacter thermautotrophicus str Delta H
Methanothermus fervidus DSM 2088
Methanotorris igneus Kol 5
Methylacidiphilum infernorum V4
Methylibium petroleiphilum PM1
Methylobacillus flagellatus KT
Methylobacterium chloromethanicum CM4
Methylobacterium extorquens AM1
Methylobacterium extorquens DM4
Methylobacterium extorquens PA1
Methylobacterium nodulans ORS 2060
Methylobacterium populi BJ001
Methylobacterium radiotolerans JCM 2831
Methylobacterium sp 4-46
Methylocella silvestris BL2
Methylococcus capsulatus str Bath
Methylomonas methanica MC09
Methylotenera mobilis JLW8
Methylotenera versatilis 301
Methylovorus glucosetrophus SIP3-4
Methylovorus sp MP688
Micavibrio aeruginosavorus ARL-13
Microbacterium testaceum StLB037
Micrococcus luteus NCTC 2665
Microcystis aeruginosa NIES-843
Microlunatus phosphovorus NM-1
Mobiluncus curtisii ATCC 43063
Moorella thermoacetica ATCC 39073
Moraxella catarrhalis RH4
Muricauda ruestringensis DSM 13258
Mycobacterium abscessus ATCC 19977
Mycobacterium africanum GM041182
Mycobacterium avium 104
Mycobacterium avium subsp paratuberculosis K-10
Mycobacterium bovis AF2122_97
Mycobacterium bovis BCG str Pasteur 1173P2
Mycobacterium bovis BCG str Tokyo 172
Mycobacterium canettii CIPT 140010059
Mycobacterium gilvum PYR-GCK
Mycobacterium leprae Br4923
Mycobacterium leprae TN
Mycobacterium marinum M
Mycobacterium smegmatis str MC2 155
Mycobacterium sp JDM601
Mycobacterium sp JLS
Mycobacterium sp KMS
Mycobacterium sp MCS
Mycobacterium sp Spyr1
Mycobacterium tuberculosis CDC1551
Mycobacterium tuberculosis F11
Mycobacterium tuberculosis H37Ra
Mycobacterium tuberculosis H37Rv
Mycobacterium tuberculosis KZN 1435
Mycobacterium ulcerans Agy99
Mycobacterium vanbaalenii PYR-1
Mycoplasma agalactiae
Mycoplasma agalactiae PG2
Mycoplasma arthritidis 158L3-1
Mycoplasma bovis Hubei-1
Mycoplasma bovis PG45
Mycoplasma capricolum subsp capricolum ATCC 27343
Mycoplasma conjunctivae HRC_581
Mycoplasma crocodyli MP145
Mycoplasma fermentans JER
Mycoplasma fermentans M64
Mycoplasma gallisepticum str Rlow
Mycoplasma genitalium G37
Mycoplasma haemofelis str Langford 1
Mycoplasma hominis ATCC 23114
Mycoplasma hyopneumoniae 232
Mycoplasma hyopneumoniae 7448
Mycoplasma hyopneumoniae J
Mycoplasma hyorhinis HUB-1
Mycoplasma leachii PG50
Mycoplasma mobile 163K
Mycoplasma mycoides subsp capri LC str 95010
Mycoplasma mycoides subsp mycoides SC str PG1
Mycoplasma penetrans HF-2
Mycoplasma pneumoniae M129
Mycoplasma pulmonis UAB CTIP
Mycoplasma putrefaciens KS1
Mycoplasma suis KI3806
Mycoplasma synoviae 53
Myxococcus fulvus HW-1
Myxococcus xanthus DK 1622
Nakamurella multipartita DSM 44233
Nanoarchaeum equitans Kin4-M
Natranaerobius thermophilus JW_NM-WN-LF
Natrialba magadii ATCC 43099
Natronomonas pharaonis DSM 2160
Nautilia profundicola AmH
Neisseria gonorrhoeae FA 1090
Neisseria gonorrhoeae NCCP11945
Neisseria lactamica 020-06
Neisseria meningitidis 053442
Neisseria meningitidis alpha14
Neisseria meningitidis FAM18
Neisseria meningitidis MC58
Neisseria meningitidis Z2491
Neorickettsia risticii str Illinois
Neorickettsia sennetsu str Miyayama
Nitratifractor salsuginis DSM 16511
Nitratiruptor sp SB155-2
Nitrobacter hamburgensis X14
Nitrobacter winogradskyi Nb-255
Nitrosococcus halophilus Nc4
Nitrosococcus oceani ATCC 19707
Nitrosococcus watsonii C-113
Nitrosomonas europaea ATCC 19718
Nitrosomonas eutropha C91
Nitrosomonas sp Is79A3
Nitrosopumilus maritimus SCM1
Nitrosospira multiformis ATCC 25196
Nocardia farcinica IFM 10152
Nocardioides sp JS614
Nocardiopsis dassonvillei subsp dassonvillei DSM 43111
Nostoc azollae 0708
Nostoc punctiforme PCC 73102
Nostoc sp PCC 7120
Novosphingobium aromaticivorans DSM 12444
Novosphingobium sp PP1Y
Oceanithermus profundus DSM 14977
Oceanobacillus iheyensis HTE831
Ochrobactrum anthropi ATCC 49188
Odoribacter splanchnicus DSM 20712
Oenococcus oeni PSU-1
Oligotropha carboxidovorans OM5
Olsenella uli DSM 7084
Onion yellows phytoplasma OY-M
Opitutus terrae PB90-1
Orientia tsutsugamushi str Boryong
Orientia tsutsugamushi str Ikeda
Oscillibacter valericigenes Sjm18-20
Paenibacillus mucilaginosus KNP414
Paenibacillus polymyxa E681
Paenibacillus polymyxa SC2
Paenibacillus sp JDR-2
Paenibacillus sp Y412MC10
Paludibacter propionicigenes WB4
Pantoea ananatis LMG 20103
Pantoea vagans C9-1
Parabacteroides distasonis ATCC 8503
Parachlamydia acanthamoebae UV7
Paracoccus denitrificans PD1222
Parvibaculum lavamentivorans DS-1
Parvularcula bermudensis HTCC2503
Pasteurella multocida subsp multocida str Pm70
Pectobacterium atrosepticum SCRI1043
Pectobacterium carotovorum subsp carotovorum PC1
Pectobacterium wasabiae WPP163
Pediococcus pentosaceus ATCC 25745
Pedobacter heparinus DSM 2366
Pelobacter carbinolicus DSM 2380
Pelobacter propionicus DSM 2379
Pelodictyon phaeoclathratiforme BU-1
Pelotomaculum thermopropionicum SI
Persephonella marina EX-H1
Petrotoga mobilis SJ95
Phenylobacterium zucineum HLK1
Photobacterium profundum SS9
Photorhabdus asymbiotica subsp asymbiotica ATCC 43949
Photorhabdus luminescens subsp laumondii TTO1
Picrophilus torridus DSM 9790
Pirellula staleyi DSM 6068
Planctomyces limnophilus DSM 3776
Polaromonas naphthalenivorans CJ2
Polaromonas sp JS666
Polymorphum gilvum SL003B-26A1
Polynucleobacter necessarius subsp asymbioticus QLW-P1DMWA-1
Polynucleobacter necessarius subsp necessarius STIR1
Porphyromonas asaccharolytica DSM 20707
Porphyromonas gingivalis ATCC 33277
Porphyromonas gingivalis TDC60
Porphyromonas gingivalis W83
Prevotella denticola F0289
Prevotella melaninogenica ATCC 25845
Prevotella ruminicola 23
Prochlorococcus marinus str AS9601
Prochlorococcus marinus str MIT 9211
Prochlorococcus marinus str MIT 9215
Prochlorococcus marinus str MIT 9301
Prochlorococcus marinus str MIT 9303
Prochlorococcus marinus str MIT 9312
Prochlorococcus marinus str MIT 9313
Prochlorococcus marinus str MIT 9515
Prochlorococcus marinus str NATL1A
Prochlorococcus marinus str NATL2A
Prochlorococcus marinus subsp marinus str CCMP1375
Prochlorococcus marinus subsp pastoris str CCMP1986
Propionibacterium acnes KPA171202
Propionibacterium acnes SK137
Propionibacterium freudenreichii subsp shermanii CIRM-BIA1
Prosthecochloris aestuarii DSM 271
Proteus mirabilis HI4320
Pseudoalteromonas atlantica T6c
Pseudoalteromonas haloplanktis TAC125
Pseudoalteromonas sp SM9913
Pseudogulbenkiania sp NH8B
Pseudomonas aeruginosa LESB58
Pseudomonas aeruginosa PA7
Pseudomonas aeruginosa PAO1
Pseudomonas aeruginosa UCBPP-PA14
Pseudomonas brassicacearum subsp brassicacearum NFM421
Pseudomonas entomophila L48
Pseudomonas fluorescens Pf0-1
Pseudomonas fluorescens Pf-5
Pseudomonas fluorescens SBW25
Pseudomonas fulva 12-X
Pseudomonas mendocina NK-01
Pseudomonas mendocina ymp
Pseudomonas putida F1
Pseudomonas putida GB-1
Pseudomonas putida KT2440
Pseudomonas putida S16
Pseudomonas putida W619
Pseudomonas stutzeri A1501
Pseudomonas stutzeri ATCC 17588 = LMG 11199
Pseudomonas syringae pv phaseolicola 1448A
Pseudomonas syringae pv syringae B728a
Pseudomonas syringae pv tomato str DC3000
Pseudonocardia dioxanivorans CB1190
Pseudoxanthomonas suwonensis 11-1
Psychrobacter arcticus 273-4
Psychrobacter cryohalolentis K5
Psychrobacter sp PRwf-1
Psychromonas ingrahamii 37
Pusillimonas sp T7-7
Pyrobaculum aerophilum str IM2
Pyrobaculum arsenaticum DSM 13514
Pyrobaculum calidifontis JCM 11548
Pyrobaculum islandicum DSM 4184
Pyrococcus abyssi GE5
Pyrococcus furiosus DSM 3638
Pyrococcus horikoshii OT3
Pyrococcus sp NA2
Pyrococcus yayanosii CH1
Pyrolobus fumarii 1A
Rahnella sp Y9602
Ralstonia eutropha H16
Ralstonia eutropha JMP134
Ralstonia pickettii 12D
Ralstonia pickettii 12J
Ralstonia solanacearum CFBP2957
Ralstonia solanacearum GMI1000
Ralstonia solanacearum PSI07
Ramlibacter tataouinensis TTB310
Renibacterium salmoninarum ATCC 33209
Rhizobium etli CFN 42
Rhizobium etli CIAT 652
Rhizobium leguminosarum bv trifolii WSM1325
Rhizobium leguminosarum bv trifolii WSM2304
Rhizobium leguminosarum bv viciae 3841
Rhodobacter capsulatus SB 1003
Rhodobacter sphaeroides 241
Rhodobacter sphaeroides ATCC 17025
Rhodobacter sphaeroides ATCC 17029
Rhodobacter sphaeroides KD131
Rhodococcus equi 103S
Rhodococcus erythropolis PR4
Rhodococcus jostii RHA1
Rhodococcus opacus B4
Rhodoferax ferrireducens T118
Rhodopirellula baltica SH 1
Rhodopseudomonas palustris BisA53
Rhodopseudomonas palustris BisB18
Rhodopseudomonas palustris BisB5
Rhodopseudomonas palustris CGA009
Rhodopseudomonas palustris HaA2
Rhodopseudomonas palustris TIE-1
Rhodospirillum centenum SW
Rhodospirillum rubrum ATCC 11170
Rhodothermus marinus DSM 4252
Rhodothermus marinus SG05JP17-172
Rickettsia africae ESF-5
Rickettsia akari str Hartford
Rickettsia bellii OSU 85-389
Rickettsia bellii RML369-C
Rickettsia canadensis str McKiel
Rickettsia conorii str Malish 7
Rickettsia felis URRWXCal2
Rickettsia heilongjiangensis 054
Rickettsia japonica YH
Rickettsia massiliae MTU5
Rickettsia peacockii str Rustic
Rickettsia prowazekii str Madrid E
Rickettsia rickettsii str Iowa
Rickettsia rickettsii str Sheila Smith
Rickettsia typhi str Wilmington
Riemerella anatipestifer DSM 15868
Robiginitalea biformata HTCC2501
Roseburia hominis A2-183
Roseiflexus castenholzii DSM 13941
Roseiflexus sp RS-1
Roseobacter denitrificans OCh 114
Rothia mucilaginosa DY-18
Rubrobacter xylanophilus DSM 9941
Ruegeria pomeroyi DSS-3
Ruegeria sp TM1040
Runella slithyformis DSM 19594
Saccharomonospora viridis DSM 43017
Saccharophagus degradans 2-40
Saccharopolyspora erythraea NRRL 2338
Salinibacter ruber DSM 13855
Salinibacter ruber M8
Salinispora arenicola CNS-205
Salinispora tropica CNB-440
Salmonella bongori NCTC 12419
Salmonella enterica subsp arizonae serovar 62_z4_z23_ str RSK2980
Salmonella enterica subsp enterica serovar Agona str SL483
Salmonella enterica subsp enterica serovar Choleraesuis str SC-B67
Salmonella enterica subsp enterica serovar Dublin str CT_02021853
Salmonella enterica subsp enterica serovar Enteritidis str P125109
Salmonella enterica subsp enterica serovar Gallinarum str 287_91
Salmonella enterica subsp enterica serovar Heidelberg str SL476
Salmonella enterica subsp enterica serovar Newport str SL254
Salmonella enterica subsp enterica serovar Paratyphi A str AKU_12601
Salmonella enterica subsp enterica serovar Paratyphi A str ATCC 9150
Salmonella enterica subsp enterica serovar Paratyphi B str SPB7
Salmonella enterica subsp enterica serovar Paratyphi C strain RKS4594
Salmonella enterica subsp enterica serovar Schwarzengrund str CVM19633
Salmonella enterica subsp enterica serovar Typhi str CT18
Salmonella enterica subsp enterica serovar Typhi str Ty2
Salmonella enterica subsp enterica serovar Typhimurium str LT2
Sanguibacter keddieii DSM 10542
Sebaldella termitidis ATCC 33386
Segniliparus rotundus DSM 44985
Serratia proteamaculans 568
Serratia sp AS12
Serratia sp AS9
Shewanella amazonensis SB2B
Shewanella baltica OS155
Shewanella baltica OS185
Shewanella baltica OS195
Shewanella baltica OS223
Shewanella denitrificans OS217
Shewanella frigidimarina NCIMB 400
Shewanella halifaxensis HAW-EB4
Shewanella loihica PV-4
Shewanella oneidensis MR-1
Shewanella pealeana ATCC 700345
Shewanella piezotolerans WP3
Shewanella putrefaciens CN-32
Shewanella sediminis HAW-EB3
Shewanella sp ANA-3
Shewanella sp MR-4
Shewanella sp MR-7
Shewanella sp W3-18-1
Shewanella violacea DSS12
Shewanella woodyi ATCC 51908
Shigella boydii CDC 3083-94
Shigella boydii Sb227
Shigella dysenteriae Sd197
Shigella flexneri 2a str 2457T
Shigella flexneri 2a str 301
Shigella flexneri 5 str 8401
Shigella sonnei Ss046
Sideroxydans lithotrophicus ES-1
Simkania negevensis Z
Sinorhizobium fredii NGR234
Sinorhizobium medicae WSM419
Sinorhizobium meliloti 1021
Slackia heliotrinireducens DSM 20476
Sodalis glossinidius str morsitans
Sorangium cellulosum So ce 56
Sphaerobacter thermophilus DSM 20745
Sphingobacterium sp 21
Sphingobium japonicum UT26S
Sphingobium sp SYK-6
Sphingomonas wittichii RW1
Sphingopyxis alaskensis RB2256
Spirochaeta caldaria DSM 7334
Spirochaeta coccoides DSM 17374
Spirochaeta smaragdinae DSM 11293
Spirochaeta sp Buddy
Spirochaeta thermophila DSM 6192
Spirosoma linguale DSM 74
Stackebrandtia nassauensis DSM 44728
Staphylococcus aureus RF122
Staphylococcus aureus subsp aureus COL
Staphylococcus aureus subsp aureus ED98
Staphylococcus aureus subsp aureus JH1
Staphylococcus aureus subsp aureus JH9
Staphylococcus aureus subsp aureus MRSA252
Staphylococcus aureus subsp aureus MSSA476
Staphylococcus aureus subsp aureus Mu3
Staphylococcus aureus subsp aureus Mu50
Staphylococcus aureus subsp aureus MW2
Staphylococcus aureus subsp aureus N315
Staphylococcus aureus subsp aureus NCTC 8325
Staphylococcus aureus subsp aureus str Newman
Staphylococcus aureus subsp aureus USA300_FPR3757
Staphylococcus aureus subsp aureus USA300_TCH1516
Staphylococcus carnosus subsp carnosus TM300
Staphylococcus epidermidis ATCC 12228
Staphylococcus epidermidis RP62A
Staphylococcus haemolyticus JCSC1435
Staphylococcus lugdunensis HKU09-01
Staphylococcus pseudintermedius HKU10-03
Staphylococcus saprophyticus subsp saprophyticus ATCC 15305
Staphylothermus marinus F1
Stenotrophomonas maltophilia JV3
Stenotrophomonas maltophilia K279a
Stenotrophomonas maltophilia R551-3
Streptobacillus moniliformis DSM 12112
Streptococcus agalactiae 2603V_R
Streptococcus agalactiae A909
Streptococcus agalactiae NEM316
Streptococcus dysgalactiae subsp equisimilis GGS_124
Streptococcus equi subsp equi 4047
Streptococcus equi subsp zooepidemicus
Streptococcus equi subsp zooepidemicus MGCS10565
Streptococcus gallolyticus subsp gallolyticus ATCC BAA-2069
Streptococcus gallolyticus UCN34
Streptococcus gordonii str Challis substr CH1
Streptococcus mitis B6
Streptococcus mutans NN2025
Streptococcus mutans UA159
Streptococcus oralis Uo5
Streptococcus parasanguinis ATCC 15912
Streptococcus parauberis KCTC 11537
Streptococcus pasteurianus ATCC 43144
Streptococcus pneumoniae 670-6B
Streptococcus pneumoniae 70585
Streptococcus pneumoniae AP200
Streptococcus pneumoniae ATCC 700669
Streptococcus pneumoniae CGSP14
Streptococcus pneumoniae D39
Streptococcus pneumoniae G54
Streptococcus pneumoniae Hungary19A-6
Streptococcus pneumoniae JJA
Streptococcus pneumoniae P1031
Streptococcus pneumoniae R6
Streptococcus pneumoniae Taiwan19F-14
Streptococcus pneumoniae TCH8431_19A
Streptococcus pneumoniae TIGR4
Streptococcus pseudopneumoniae IS7493
Streptococcus pyogenes M1 GAS
Streptococcus pyogenes MGAS10270
Streptococcus pyogenes MGAS10394
Streptococcus pyogenes MGAS10750
Streptococcus pyogenes MGAS2096
Streptococcus pyogenes MGAS315
Streptococcus pyogenes MGAS5005
Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS8232
Streptococcus pyogenes MGAS9429
Streptococcus pyogenes NZ131
Streptococcus pyogenes SSI-1
Streptococcus pyogenes str Manfredo
Streptococcus salivarius CCHSS3
Streptococcus sanguinis SK36
Streptococcus suis 05ZYH33
Streptococcus suis 98HAH33
Streptococcus suis BM407
Streptococcus suis P1_7
Streptococcus suis SC84
Streptococcus suis ST3
Streptococcus thermophilus CNRZ1066
Streptococcus thermophilus LMD-9
Streptococcus thermophilus LMG 18311
Streptococcus uberis 0140J
Streptomyces avermitilis MA-4680
Streptomyces coelicolor A32
Streptomyces griseus subsp griseus NBRC 13350
Streptomyces scabiei 8722
Streptomyces sp SirexAA-E
Streptosporangium roseum DSM 43021
Sulfobacillus acidophilus TPY
Sulfolobus acidocaldarius DSM 639
Sulfolobus islandicus LD85
Sulfolobus islandicus LS215
Sulfolobus islandicus M1425
Sulfolobus islandicus M1627
Sulfolobus islandicus M164
Sulfolobus islandicus YG5714
Sulfolobus islandicus YN1551
Sulfolobus solfataricus P2
Sulfolobus tokodaii str 7
Sulfuricurvum kujiense DSM 16994
Sulfurihydrogenibium azorense Az-Fu1
Sulfurihydrogenibium sp YO3AOP1
Sulfurimonas autotrophica DSM 16294
Sulfurimonas denitrificans DSM 1251
Sulfurospirillum deleyianum DSM 6946
Sulfurovum sp NBC37-1
Symbiobacterium thermophilum IAM 14863
Synechococcus elongatus PCC 6301
Synechococcus elongatus PCC 7942
Synechococcus sp CC9311
Synechococcus sp CC9605
Synechococcus sp CC9902
Synechococcus sp JA-2-3Ba2-13
Synechococcus sp JA-3-3Ab
Synechococcus sp PCC 7002
Synechococcus sp RCC307
Synechococcus sp WH 7803
Synechococcus sp WH 8102
Synechocystis sp PCC 6803
Syntrophobacter fumaroxidans MPOB
Syntrophobotulus glycolicus DSM 8271
Syntrophomonas wolfei subsp wolfei str Goettingen
Syntrophothermus lipocalidus DSM 12680
Syntrophus aciditrophicus SB
Taylorella asinigenitalis MCE3
Taylorella equigenitalis MCE9
Tepidanaerobacter sp Re1
Teredinibacter turnerae T7901
Tetragenococcus halophilus NBRC 12172
Thauera sp MZ1T
Thermaerobacter marianensis DSM 12885
Thermanaerovibrio acidaminovorans DSM 6589
Thermincola potens JR
Thermoanaerobacter italicus Ab9
Thermoanaerobacter mathranii subsp mathranii str A3
Thermoanaerobacter pseudethanolicus ATCC 33223
Thermoanaerobacter sp X513
Thermoanaerobacter sp X514
Thermoanaerobacter tengcongensis MB4
Thermoanaerobacterium thermosaccharolyticum DSM 571
Thermobaculum terrenum ATCC BAA-798
Thermobifida fusca YX
Thermobispora bispora DSM 43833
Thermococcus gammatolerans EJ3
Thermococcus kodakarensis KOD1
Thermococcus onnurineus NA1
Thermococcus sibiricus MM 739
Thermococcus sp 4557
Thermocrinis albus DSM 14484
Thermodesulfatator indicus DSM 15286
Thermodesulfobacterium sp OPB45
Thermodesulfobium narugense DSM 14796
Thermodesulfovibrio yellowstonii DSM 11347
Thermofilum pendens Hrk 5
Thermomicrobium roseum DSM 5159
Thermomonospora curvata DSM 43183
Thermoplasma acidophilum DSM 1728
Thermoplasma volcanium GSS1
Thermoproteus neutrophilus V24Sta
Thermoproteus tenax Kra 1
Thermoproteus uzoniensis 768-20
Thermosediminibacter oceani DSM 16646
Thermosipho africanus TCF52B
Thermosipho melanesiensis BI429
Thermosphaera aggregans DSM 11486
Thermosynechococcus elongatus BP-1
Thermotoga lettingae TMO
Thermotoga maritima MSB8
Thermotoga naphthophila RKU-10
Thermotoga neapolitana DSM 4359
Thermotoga petrophila RKU-1
Thermotoga sp RQ2
Thermotoga thermarum DSM 5069
Thermovibrio ammonificans HB-1
Thermus scotoductus SA-01
Thermus thermophilus HB27
Thermus thermophilus HB8
Thioalkalimicrobium cyclicum ALM1
Thioalkalivibrio sp K90mix
Thioalkalivibrio sulfidophilus HL-EbGr7
Thiobacillus denitrificans ATCC 25259
Thiomicrospira crunogena XCL-2
Thiomonas intermedia K12
Tolumonas auensis DSM 9187
Treponema azotonutricium ZAS-9
Treponema brennaborense DSM 12168
Treponema denticola ATCC 35405
Treponema pallidum subsp pallidum SS14
Treponema pallidum subsp pallidum str Nichols
Treponema paraluiscuniculi Cuniculi A
Treponema primitia ZAS-2
Treponema succinifaciens DSM 2489
Trichodesmium erythraeum IMS101
Tropheryma whipplei str Twist
Tropheryma whipplei TW08_27
Truepera radiovictrix DSM 17093
Tsukamurella paurometabola DSM 20162
uncultured methanogenic archaeon RC-I
Ureaplasma parvum serovar 3 str ATCC 27815
Ureaplasma parvum serovar 3 str ATCC 700970
Ureaplasma urealyticum serovar 10 str ATCC 33699
Variovorax paradoxus EPS
Variovorax paradoxus S110
Veillonella parvula DSM 2008
Verminephrobacter eiseniae EF01-2
Verrucosispora maris AB-18-032
Vibrio anguillarum 775
Vibrio cholerae M66-2
Vibrio cholerae MJ-1236
Vibrio cholerae O1 biovar El Tor str N16961
Vibrio cholerae O395
Vibrio fischeri ES114
Vibrio fischeri MJ11
Vibrio harveyi ATCC BAA-1116
Vibrio parahaemolyticus RIMD 2210633
Vibrio sp Ex25
Vibrio splendidus LGP32
Vibrio vulnificus CMCP6
Vibrio vulnificus MO6-24_O
Vibrio vulnificus YJ016
Vulcanisaeta distributa DSM 14429
Vulcanisaeta moutnovskia 768-28
Waddlia chondrophila WSU 86-1044
Weeksella virosa DSM 16922
Weissella koreensis KACC 15510
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
Wolbachia endosymbiont of Culex quinquefasciatus Pel
Wolbachia endosymbiont of Drosophila melanogaster
Wolbachia endosymbiont strain TRS of Brugia malayi
Wolbachia sp wRi
Wolinella succinogenes DSM 1740
Xanthobacter autotrophicus Py2
Xanthomonas albilineans GPE PC73
Xanthomonas axonopodis pv citri str 306
Xanthomonas axonopodis pv citrumelo F1
Xanthomonas campestris pv campestris str 8004
Xanthomonas campestris pv campestris str ATCC 33913
Xanthomonas campestris pv campestris str B100
Xanthomonas campestris pv vesicatoria str 85-10
Xanthomonas oryzae pv oryzae KACC10331
Xanthomonas oryzae pv oryzae MAFF 311018
Xanthomonas oryzae pv oryzae PXO99A
Xenorhabdus bovienii SS-2004
Xenorhabdus nematophila ATCC 19061
Xylanimonas cellulosilytica DSM 15894
Xylella fastidiosa 9a5c
Xylella fastidiosa M12
Xylella fastidiosa M23
Xylella fastidiosa Temecula1
Yersinia enterocolitica subsp enterocolitica 8081
Yersinia enterocolitica subsp palearctica 1055Rr
Yersinia pestis Angola
Yersinia pestis Antiqua
Yersinia pestis biovar Microtus str 91001
Yersinia pestis CO92
Yersinia pestis KIM10plus
Yersinia pestis Nepal516
Yersinia pestis Pestoides F
Yersinia pestis Z176003
Yersinia pseudotuberculosis IP 31758
Yersinia pseudotuberculosis IP 32953
Yersinia pseudotuberculosis PB1_plus
Yersinia pseudotuberculosis YPIII
Zobellia galactanivorans
Zunongwangia profunda SM-A87
Zymomonas mobilis subsp mobilis NCIMB 11163
Zymomonas mobilis subsp mobilis ZM4
Zymomonas mobilis subsp pomaceae ATCC 29192
use
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key to select more than one genome
Homo sapiens
(NCBI 36) as non-target genome
Email address for notifing about the results:
Email is optional (*recommended, especially when human genome is used, because it may run long time)
PCR PARAMETERS FOR PRIMER3:
OPTIONS FOR PRIMER3:
Targets
Excluded Regions
Product size Ranges
Optimal size of a product
Number To Return
Max 3' Stability
Primer hairpin stability
Primer size
(max/min/opt)
Primer Tm
(max/min/opt/max_diff)
Primer GC%
(max/min/opt)
Max Self Complementarity:
Max 3\' Self Complementarity:
Max number of N-s:
Max Poly-X:
GC Clamp:
Monovalent Concentration:
Annealing Oligo Concentration:
Divalent Concentration:
Maximal length of alternative product:
dNTP Concentration:
Salt correction formula:
SantaLucia98
Owczarzy04
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