StrainSeeker - Download and install

Downloadable version of StrainSeeker is for detecting bacterial strains on your own UNIX server. If you are interested in analyzing large amounts of data or want to create your own database, this is the version for you. For a simple preview you can use the online version of StrainSeeker.

For your reference, we also provide a manual and in case of problems or suggestions, please contact us.

Installing instructions

Downloads

All downloads shown here are for UNIX only (GenomeTester4 programs are compiled for UNIX).
OSX versions will soon be available.
StrainSeeker for Windows will not be available.

  1. Database - pre-built from 4,324 NCBI RefSeq strains (w32) | (18.5 GB) Last update 10-feb-2016
  2. Database - pre-built from 4,324 NCBI RefSeq strains (w16) | (4.5 GB) Last update 21-feb-2017

  3. StrainSeeker programs and scripts Last update 10-feb-2016

  4. Optional data files and scripts Last update 10-feb-2016